KEGG   Coregonus clupeaformis (lake whitefish): 121575394
Entry
121575394         CDS       T08357                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 11A isoform X1
  KO
K22415  zinc finger CCCH domain-containing protein 11
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121575394
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     121575394
SSDB
Motif
Pfam: zf-CCCH_3 zf-CCCH_2
Other DBs
NCBI-GeneID: 121575394
NCBI-ProteinID: XP_041744397
LinkDB
Position
10:complement(46300969..46322843)
AA seq 926 aa
MTNHGDDCYFFYYSNCAKGDSCPFRHCEAAMGSEVVCSLWQESRCFRQVCKFRHMEIKKN
RKEIACYWENQPAGCQKPHCAFHHEKPRFIDGQYVPPNKSSALKEEEESHEDSLPPVPIP
SPANPQLRGVIKAETQENVPSPTHPPVVINPADDEDEDEDDQLSEGEDSRSGSDGSRVVS
PRKMAVGSSSDDSLDFGVRTLEEIRLRKALKASMRRAGYPVPSQGSDQRNNGASGEKENM
RSFIRPSLVTAKDDTVVFGEETGRRNVADRLGKRVVKEVPAGGDLPMKRCLAERLGRKMD
EGEMDLPPQKALKPVRDRLGLPVEPTTASESAERNSESTAPEVIRIKTLEEIRQEKLAKS
QGQAPGDNPLPSTPDTTSTTKAPKRGTTGKPAASLHVKTFSEILHAKRKLEEDQQQGPSL
RKAKQAAMEAAPGYSQAQGPTETAMPSRVAPPGGGVKVKTLEEIRREKAAKMQARGQEAS
NGKSPGSASGEGGTKKPLVLRINKAASPAASTTTQKTSEVTEKTEKQTEPASVATEASPA
NGRSDAVSGDSVKVKTFEEIMREKRLRRQQLQEEQASSTSQPEGSAEADSFPKQATGPAL
QREKRARVSPPAASSPPSITLEAPAQALKTPLRQRITLKPKAASLVSCATASPQQGSPLR
QAEADSPSLSPRSSSAAPGKRKRGFLGGSSPPKQAALAAAVASPGPSVKGSPVEKAQDGA
QKMCPGQATEAKVRPKLNVRPSVMKLAAQVKPGQKRTSARSAVAAVKPLNSTYAVQEEPL
QELPCKRREVSSTSSSVKDQMSSVVSRRPPTILGPGLSSSPLREEFQAVPVNQHSPAITI
AAPETCIVPQSPVVNTPIQPKPRRPSVAMSRSTASAPSANCSTSAMDEFDELMNEFTDDR
LEDDLELDPGKGEDDYLLELSEMIDS
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgactaaccatggagatgactgctatttcttctactactccaactgtgctaagggtgac
agttgccccttcagacactgtgaagctgcaatgggcagtgaggtcgtttgcagcctgtgg
caggagagtcgctgtttcagacaggtctgcaagttccgccacatggagatcaagaaaaac
aggaaggagatagcttgttactgggagaaccagcctgctggctgccagaagcctcactgt
gccttccaccacgagaaaccacgctttatagacggtcaatacgtaccacccaacaaaagt
tcggccctgaaagaagaggaggagtctcatgaggattctttgcctcctgtccccatcccc
agcccagccaatccccagctccgtggggtcatcaaggcagagactcaggagaacgttccc
agccccactcacccgcctgtggttatcaacccggcagatgacgaagatgaggatgaagat
gatcagttgtcagaaggagaggacagcaggtccggctcagacggctccagagtggtctct
cccaggaagatggccgtgggctctagctcagatgattccctggactttggtgtcagaacc
ttggaggagatcagactgaggaaagccctgaaagccagtatgaggagagctggttatcca
gttcctagccagggctcagaccagcggaacaatggtgccagtggagagaaggagaacatg
agatccttcatccgtccatctctcgtcacagccaaggatgacactgtggtctttggtgaa
gagaccgggagacgcaatgtcgcggacaggcttgggaagagagtagtcaaagaagttcct
gccgggggtgacctgccaatgaaacgctgtctggcggagcgcctcgggaggaaaatggac
gagggtgaaatggacctgccccctcagaaagctctgaaacctgtcagggatagattggga
ttacctgttgaacccaccactgcctctgaatcagctgagcgcaacagtgagagtacagca
cctgaagtaatccgcatcaaaaccctggaggagatcaggcaggagaagttggccaagtcc
cagggacaagctccgggggacaaccctctcccttcaacccctgatactaccagtaccacc
aaggccccaaagagaggcaccactggcaaacctgcagccagcctccacgtgaagacattc
tctgagatcctccatgccaagaggaagctggaggaggaccagcagcaaggccccagcctc
agaaaggccaagcaggcggctatggaagcagctccagggtactcccaggcccagggaccc
actgagacagccatgcccagccgggtggcacctcctggaggtggagttaaggtaaagacc
ctggaggagatccgcagggagaaggcagccaagatgcaggcccggggacaggaggcgtcc
aacgggaaaagcccaggctcagcctctggagagggaggcaccaagaagcccctggtactg
cgcatcaacaaagctgcttctcctgctgccagcactaccacccagaagacatctgaggtg
accgagaagacggagaagcaaactgagcctgcttctgttgctactgaggccagtcctgct
aacggtaggagtgatgctgtgtccggtgacagtgtgaaggtgaagacatttgaggagatc
atgcgtgagaagaggctccgcaggcaacagctgcaggaagagcaggcctcgtccaccagc
caaccagagggctctgccgaggcagactctttcccaaaacaagccacaggccccgccctc
cagcgggagaagagggcgcgggtgagcccccctgccgcctcctctcccccctcaatcacc
ctggaggcacctgcccaggcactcaaaaccccccttcgccagcgcatcaccctcaaaccc
aaggctgcctctcttgtgtcctgcgccaccgcctccccccaacaggggtctccactgagg
caggcagaggcagactccccctcactcagccccaggagttccagcgctgccccaggcaag
aggaagagaggcttcctgggtggttccagtcccccaaagcaggctgccttagcagcagca
gtggcctcccctgggccctctgtgaaaggttctccggttgagaaggctcaggatggagcc
cagaagatgtgccctgggcaagctactgaagctaaagtgaggcccaagctgaacgtgagg
ccttctgtgatgaagctggctgcccaggtgaaaccaggccagaagagaacatcagctaga
tctgctgtcgctgcagtgaaacccctcaatagcacctacgcagtgcaggaggagccactg
caggagctgccctgcaaacggagagaggtgtcctctacttcctccagtgtgaaggaccag
atgagctctgtggtctccaggagaccccccaccatcctgggccctggcctcagctccagc
cccctgagagaggagttccaggcggtccctgtcaaccaacacagcccagccatcaccata
gcagccccagagacctgcatagtcccacagagccctgtggtgaatacacctatccagcct
aagccccggcggcccagcgttgcgatgtctcgctcgaccgcatcagccccttccgctaac
tgctccacctctgccatggacgaatttgacgagttgatgaacgagttcacagatgaccgt
ctggaggatgacttggagctggacccaggcaagggagaggatgactacctgctggagctc
tctgagatgatcgacagctag

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