Coregonus clupeaformis (lake whitefish): 121575421
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Entry
121575421 CDS
T08357
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04020
Calcium signaling pathway
cclu04218
Cellular senescence
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04270
Vascular smooth muscle contraction
cclu04530
Tight junction
cclu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121575421
04020 Calcium signaling pathway
121575421
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
121575421
09144 Cellular community - eukaryotes
04530 Tight junction
121575421
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
121575421
09153 Circulatory system
04260 Cardiac muscle contraction
121575421
04261 Adrenergic signaling in cardiomyocytes
121575421
04270 Vascular smooth muscle contraction
121575421
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121575421
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121575421
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
DUF2975
Motif
Other DBs
NCBI-GeneID:
121575421
NCBI-ProteinID:
XP_041744459
LinkDB
All DBs
Position
10:complement(49140445..49273697)
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AA seq
2146 aa
AA seq
DB search
MSANGPASAPAAPAATPVAPPVPSPVAVPPAAPVPVPTVPVGALAQKKRAQYAKSKKQGS
NANTRPARALFCLKLNNPIRRACISLVEWKPFDIFILIAIFANCMALAVYIPFPEDDSNS
TNHDLETVEHVFLVIFTIETFLKIIAYGLVAHQNAYVRNGWNMLDFVIVVVGLFSVVLEL
LTKDSVETKEEAGAAAAAAEAAAAAAALHPSAHGHGGKSGGFDVKALRAFRVLRPLRLVS
GVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCFFPSTGMIAED
EPAPCAISGHGRQCPINGTECREGWHGPNDGITNFDNFLFAMLTVFQCITMEGWTDVLYW
MNDAMGLELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLE
EDLKGYLDWITQAEDIDPDNEDEEGYEEGKRNRVTLADLTEKKKGSRFGWFSQSSDTHAS
IPASETESVNTENVAEDEVKTPCCGPFCQIISKSKFSRRWRRWNRFCRRKCRVAVKSVPF
YWLVIILVFLNTLTISSEHYNQPDWLTQVQDVANKVLLGMFTCEMMTKMYSLGLQAYFVS
LFNRFDCFVVCGGITETILVELAIMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLN
SMKSIASLLLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGE
DWNAVMYDGIMAYGGPSSSGMIVSFYFIILFICGNYILLNVFLAIAVDNLADAESLNAPR
DKKDEKKEEAPVEEEEDNAAAEEEEEEPEVPAGPRPAISELVKKEKITPIPDGSAFFIFS
KTNPIRVGCHKLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIVLGYADYVFTSMF
TFEIMLKMTTYGAFLHKGAFCRNTFNLLDLLVVGVSLVSFCIQSSAISVVKILRVLRVLR
PLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKS
SPDECKGTYILYKDGDVNQPFVHKRVWHNSEFNFDNVLMAMMALFTVSTFEGWPSLLYKA
IDSNRENLGPIYNYRIEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDK
NQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVLIMLNTLCLAVQHYGQS
ATFNYVMDILNMVFTAVFTAEMVLKLIAFKPRHYFTDAWNTFDALIVVGSVVDIAITEVN
PTEAPQLDESGNTEDNARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVA
LLIAMLFFIYAVIGMQVFGKIAMVDGTHINRNNNFQTFPQAVLLLFRCATGEAWQEIMLS
CVSGKLCDPESDYNPGEEMTCGASFAYIYFISFYMLCAFLIINLFVAVIMDNFDYLTRDW
SILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAM
NMPLNSDGTVMFNATLFALVRTALKIKTDGNLEQANEELRAVIKKIWKRTSMKLLDQVVP
PAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVGVHASQNNTAIALQAGLRTLHDIGPE
IRRAISCDLQDEELVDFIPEEDEEIYRRNGGLFGNHINHVNGDHHRRSSGPQTNATQRPL
QVQPPPHYAHMEQPVGRLCRANAMSHPHPNHHHHHNSSYGKSPKSTNINLNNANMSSLPN
GGGHHHRYYEHTPPPANGYPGHRSGPYHTDYDKPPPRGTPQGQRRRYYETYVRSHRGDAR
LPTIRREEEFDDDRCSGEYYSGEEFYEDDSMLSGDRRSYKEYLDRYQNSDTEYETPRGYH
HPDSYYNDDEQPLYQDGRRSPKRRMLPATPQGHRRPSFNFECLRRQGSQDELPHTHTALP
LHLMQHQVMAVAGLDSSRAHRLSPSRSTRSWASPPATSASKEQSPNYTPLIRVDHPGQRE
SAASSQVSLRKSSWYTDDPEYSQRTYSPIHLQVPPEYQINIEAKETHTEYRQQHHQKSAT
SLVEAVLISEGLGRYAMDPKFVAATKHEIADACEMTIDEMESAASHLLNGGMAPAVNGVN
VYPVMSERNYDLQDATASYSDEEPEVELRVPYEEDLADEMICITTL
NT seq
6441 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaacgggcccgcctctgccccggcagccccagctgcaaccccagtcgccccg
ccggtgcccagtccggtagctgtccctccggctgccccggtcccggtgccgaccgtcccg
gtgggcgcgttggcacagaagaagcgggcgcagtacgccaaaagcaagaagcagggcagc
aacgccaacaccaggcctgccagggccctgttctgcctcaaactcaacaatcccatacga
agagcctgcatcagcctggtagagtggaagccatttgatatctttatattaattgctatt
tttgccaactgtatggccttagctgtgtacatccccttccctgaggatgactccaactcc
acaaaccatgacctggaaacggtagaacatgtcttccttgtcattttcactatcgagacc
tttctgaagattatcgcctacggtttagtggcgcaccagaacgcgtatgtgagaaacgga
tggaacatgctggattttgtcatcgtcgttgttgggctgttcagtgttgtcctggagctt
ttgaccaaagactctgttgagacaaaggaggaggcgggtgcggctgcggctgcggcggag
gctgcggctgcagccgcagcgctccacccctccgcccacggccacgggggaaagtcgggc
ggcttcgacgtcaaagccctccgagcattccgtgtgctgcgacccctacgcctggtctca
ggagtgcccagtttacaggttgtgttgaactccataattaaagccatggtccctctcctc
cacatcgccctgctggtcctgtttgtcatcattatctacgccatcatcggcctggagctc
ttcattggcaaaatgcatgctacctgcttcttccccagcacaggcatgatagcggaggac
gagccggctccgtgtgcgatctcagggcatgggcgccaatgtcccatcaatggcaccgaa
tgcagggagggctggcacggccccaacgacggcatcaccaactttgacaacttccttttt
gccatgctgaccgtgttccagtgtatcaccatggaaggctggacggacgtgctttactgg
atgaatgatgctatgggtctagagcttccatgggtctactttgtatctctggtcatcttc
ggctccttctttgttctgaacctggttctgggagtgttgagcggagagttctccaaggag
agagagaaggccaaggctcgtggagactttcagaaactgcgagagaagcaacagctggag
gaggacctgaagggctacctggactggatcactcaggctgaggacatcgacccggacaac
gaggacgaggagggctacgaggagggcaaacgcaaccgggtgactctggctgacctcaca
gagaagaagaaaggaagcaggtttgggtggttcagccagtcctccgacactcatgcgagt
ataccagccagtgagacggagtcagtgaacacagagaatgtggctgaggatgaggtgaag
acaccgtgctgtggacctttttgccaaataatttcaaagtcaaagttcagtcggcgctgg
cgtcgctggaacaggttctgccgcaggaagtgccgggtggcggtgaaatcggtgcctttc
tattggctggtgatcatcctggtgtttctcaacacgctcaccatctcctcagagcactac
aaccagcctgactggctcacacaagtacaggacgtggcaaacaaggttctgctgggcatg
tttacgtgtgagatgatgaccaagatgtacagtctgggcctgcaggcctactttgtgtcc
cttttcaaccgatttgactgcttcgtggtgtgtggaggcatcaccgagaccatcctggtg
gagctggccatcatgtctcctctgggcatctctgtgttccgctgtgtccgcttgctcagg
atcttcaaggtcacacgtcactggcagtctctcagtaacttggtggcgtcgctgctgaac
tccatgaagtccatcgcctccctgctcctcctcctcttcctcttcatcatcatcttctcc
ctgctgggcatgcaggtgttcggaggcaagttcaacttcgacgagacacagaccaagagg
agcaccttcgataacttcccccaggcactgctcactgtgtttcagatcctgacaggtgaa
gactggaacgctgtgatgtatgacggcatcatggcgtacggcggcccttcttcctcaggg
atgatcgtctcattctacttcattatcctcttcatctgcggaaactacatcctgctgaac
gtcttcttggctattgctgtggacaacctggcagacgcagagtctctcaacgctccaaga
gacaaaaaggacgagaaaaaggaagaggcaccagtggaggaggaagaggacaatgctgca
gcggaggaggaggaggaggagccggaggttccagcagggccacgcccagccatctctgag
ttggtcaagaaggagaagatcacccccatccctgacggcagtgctttcttcatcttcagc
aagactaacccgatccgggtgggatgtcataaactcatcaaccaccacatcttcaccaac
ctcatcctggtcttcatcatgctcagctctgtctccctcgctgcagaggaccccatacgc
aacttctccgcacgcaacatcgtcctaggctatgcagattatgtcttcactagtatgttt
acatttgagatcatgttaaagatgaccacatacggagcgttcctccataaaggagcgttc
tgtaggaacactttcaacctgctggatctgctggtggtgggggtctccctggtctccttc
tgcatccagtcctctgccatctcagtggtgaagattctgagagtcctgcgagtgctcagg
cccctgagggccatcaaccgagccaagggcctcaagcacgtggtccagtgtgtgtttgtg
gccatcaggaccattggtaacatcatgatcgtcaccacgctgctgcagttcatgttcgcc
tgcataggagtgcagctattcaaggggaagttttaccgctgcacagatgaagccaagtct
agccccgacgaatgcaagggcacctacatcctttataaggatggggacgtgaaccagcca
ttcgtccataagagagtgtggcacaacagcgagttcaactttgacaacgtgctcatggcc
atgatggctctgttcactgtgtctaccttcgagggctggccttcgttgctctacaaggcc
atagactcaaacagggagaacctgggtcccatctacaactaccgcatcgagatctccatc
ttcttcatcatctacatcatcatcatcgccttcttcatgatgaacatcttcgtgggtttc
gtcatcgttacatttcaggagcagggagagaaagagtacaagaactgtgagctggataag
aaccagcgtcagtgtgtggagtatgccctgaaggcccgtccattgaggaggtatatccct
aagaacccctaccagtataagttctggtatgtggtcaactccacagggtttgagtacatc
atgttcgtcctcatcatgctcaacacactatgcctggctgtgcagcactatggccagtct
gcaacatttaactatgtgatggacatcctcaacatggtcttcactgctgttttcactgcg
gagatggtgctcaaactcatcgccttcaaacccaggcactatttcactgatgcgtggaac
acgtttgatgccttaattgtagttggtagcgtcgttgatattgctatcactgaagtgaat
ccaacggaggctcctcagttggatgagtcggggaacacggaggacaacgctcgcatctcc
atcaccttcttccgtctgttccgagtcatgcgattggtcaagctgctgagcagaggggag
ggtatccgcacactcctgtggaccttcatcaagtccttccaggctctgccatatgttgcc
cttctgatcgccatgctcttcttcatctatgctgtcattggcatgcaggtgtttgggaag
atagctatggtggacggcacccacatcaacaggaacaacaacttccagaccttccctcag
gctgtgttgctgctcttcaggtgtgccacgggcgaggcgtggcaggagatcatgttgtcg
tgtgtttcgggaaagctatgtgacccagagtcggactacaaccctggggaagagatgacc
tgtggagccagcttcgcctacatctacttcatcagcttctacatgctctgtgccttcctg
attatcaatttgtttgtggctgtcatcatggacaactttgactaccttactcgtgattgg
tccatcctgggtcctcaccacttggacgagttcaagaggatctggtctgagtacgaccca
gaggccaagggcaggattaaacatctggacgtggtcactctgctccgacgcatccagcct
ccactgggcttcggcaaactctgccctcatagagtggcctgcaagagactggtggccatg
aacatgcctctaaacagtgacggcaccgtcatgttcaatgctacgctatttgcattagta
cgcaccgccctgaagatcaaaacagacggtaatctggagcaggccaacgaggagctgaga
gccgtcatcaagaagatctggaagaggaccagcatgaagctgctggaccaagtggtgccc
cctgctggtgatgatgaggtaaccgtggggaagttctatgccaccttcctgatacaggac
tactttaggaaattcaagaaacgtaaagaggagggcctggtgggggtgcacgcctctcag
aacaacacagccatcgctcttcaggctggccttcgcacgctacatgatattgggcctgaa
attcgccgagcgatatcatgtgacctgcaagatgaggagctagtagactttattccagag
gaggacgaggagatttataggcgcaatggtggcctgttcggtaaccacatcaaccacgtg
aacggggaccaccaccggcgctcatcggggccccagaccaacgccacccagcggcccctg
caggtgcagccgcctccacactatgcccacatggagcagccggtggggcgtctctgccgg
gccaacgccatgtcccacccgcaccccaatcaccaccaccaccacaactcctcatatggc
aagtcgcccaagtccaccaacatcaacctgaacaacgccaacatgtccagtctgcccaac
ggaggaggacaccaccaccgctactatgagcacactccgcccccagccaacggttaccca
ggacaccgcagtggcccctaccacaccgactacgacaagccgccacctcgcggcacgcca
cagggacaaagaaggcgctactatgagacctatgttaggtcccaccggggagacgcccgc
cttcccaccatccgacgggaggaggagtttgacgatgacaggtgctcgggagagtactac
agcggagaggagttctacgaggacgacagcatgttgtcaggagacaggaggtcctataag
gaatacctggacaggtaccagaacagtgacacggagtacgagactcctagaggctaccac
caccccgacagttactacaacgatgacgagcaacccctctaccaagacggaaggaggtca
cctaagagacggatgcttcctgccacgccccaaggtcacaggaggccctccttcaacttt
gagtgtctgagaaggcaaggcagtcaggatgagctgccacacacacacactgctctacca
ctgcacctaatgcagcaccaggtgatggctgtagcagggctggactccagcagagcccac
cgtctctccccctcccgctccacccgctcctgggccagtccacccgccacttcggccagt
aaggagcagtcgcccaactacacacccctcatccgcgtggatcaccctggacaaagggag
agtgccgccagcagccaggtgtctctgaggaagagctcttggtacacagacgacccagag
tactcccagaggacctactcccccatccatctccaggtgcccccagagtaccagattaat
atagaggcgaaagaaacgcacactgagtaccgccagcagcaccatcagaagagcgccact
agcttggtggaggcggtgttgatatcagaggggctcggaagatacgccatggatccaaag
ttcgtggccgccaccaagcacgagatagcggacgcgtgcgagatgaccatcgacgagatg
gagagcgcggccagccacctgctgaacggtggcatggcgccggcggttaacggggtcaac
gtgtaccctgtcatgagcgagcggaactacgacctccaagacgccacagccagttatagt
gacgaggagccggaggtggagcttagagtgccgtacgaggaggacctggcagacgagatg
atctgcatcaccactttatag
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integrated database retrieval system
