Coregonus clupeaformis (lake whitefish): 121575425
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Entry
121575425 CDS
T08357
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121575425
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121575425
04261 Adrenergic signaling in cardiomyocytes
121575425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121575425
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121575425
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
dCache_1
VWA_3
VWA_2
MCP-like_PDC_1
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
121575425
NCBI-ProteinID:
XP_045078996
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Position
10:complement(49062158..49125737)
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AA seq
1085 aa
AA seq
DB search
MLWHSRILFSHVCCASFLLFWIMLGTVVDVMGSQQGIPLSVVKLWASAFGGEIKSISAKY
SGSQLLQKKYKEFEKSVRVEEIDGMKVVKTLAKKMEEMFRMKKVAMLRLVEAAEEAHLQH
EENPELQYEYFNAVLINEVDEEGNNVELGGEFVLEPNDHFNNLSVNLSLSVVQVPTNMYN
KDPAIVNGVYWSEALNKVFVDNFEKDPSLIWQYFGSAKGFFRQYPGVKWHPDEHGVIAFD
CRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNQE
MHYVEPCLNGTLVRADRNNKAHFREHLDKLFAKGIGLLGDALTEAFTILNDFNQTGHGSV
CSQAIMLVTDGATQMYDDVFAKFNWPDRKVRIFPYLIGRESAFADNMKWMACANKGYFSQ
ISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSTLSQAHKSRNKKGPSLMTTVA
MPVFSTKNETKNQGILLGVVGTDIPLQELMKIIPKHMLGIHGYAFAITNNGFILTHPDLR
PLYQEGQKRRKPNYSSVDLSEVEWEDKDDFLRNAMVNRKTGTFSMEVKKTVDKGKRLLKM
HNDYFYTEVKGTPFSVGVALSRGHGKFFFRGNVSVEAGLLDLEQPDVALADEWTYCNTDE
HHEHRSLSQIQAIKLYLTGRKTNIKCDRELIQEVLFDAVVTAPLEAYWTGLALNKSENSD
KGVEIAYLGTRTGLSRTNLFVVPEHLSNQDFLMAEDKEGVFNADHFPLWYKRAAEQVPGT
FVYSIPFGGNKNKSVVLASTAIQLLDDRKSPIVASVGIQMKLDFFQRKFWTASRQCAALD
GKCTISCDNEDIKCYLIDNNGFILVTEDYSQTGLFFGEVEGAVMNKLLLMGSFKRITLYD
YQALCREYAGSSDSSCSLSHPFSIVKWLLTELVIFLLEFNLYSWWHVDLSVKGQYGKTMM
VPCDTEYPAFVSERTIKETTGNIDCEGCARSFVIQQIPSSNLFMVVVDNKCDCSSAPLVS
MDPIEIMYNESLKCDRLKFQKDRKRPESCHPFHPEENAMECGRAAGLSAPLTAALLPLLA
TLISR
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggcattcgaggatcctcttttcgcacgtgtgttgcgccagcttccttctgttc
tggattatgctgggcacggtggtggacgtgatggggtcccagcaagggattccactctca
gtggtgaagttatgggcctcagcgtttggtggagaaattaaatcaatttctgcaaaatac
tctggatcccagctgctgcagaagaaatataaagaatttgaaaagtccgtccgagtggaa
gaaattgatggcatgaaagtggtcaaaactctagcaaagaagatggaggaaatgttccgg
atgaaaaaggtggccatgctgcggctggtggaggcagcagaggaggcccatctacagcac
gaggagaacccagagctgcagtatgagtactttaacgcagtgctgatcaacgaggtggat
gaggagggcaacaacgtggagctgggaggagagttcgtcctggaacccaatgaccacttc
aacaacctgtcagtcaacctcagcctcagtgtggtgcaggtgcccaccaacatgtacaac
aaagatccagccatagtgaatggggtgtattggtcggaggccttgaataaagtgtttgtg
gataactttgaaaaagacccgtccctgatatggcagtactttggaagtgccaagggcttc
tttaggcagtatcccggggtcaaatggcatccagacgaacacggggtcattgccttcgac
tgcaggaacaggaagtggtacatccaggcagcgacgtctcctaaagacgtggtgatcctg
gtggacgttagtggcagtatgaagggcctgagactgaccatcgccagacagactgtctcc
tctatactggacacactgggagacgatgacttcttcaacatcatcgcttacaatcaggag
atgcactacgtggagccttgtctgaacggtacactggtacgggctgacagaaataataaa
gctcatttcagagaacatctggacaagctgtttgccaaagggattggtctgctgggtgac
gctctgaccgaagcgttcaccattctaaatgattttaaccagactgggcatggcagtgtg
tgtagccaggctatcatgctggtgaccgacggggcaacgcagatgtacgacgacgtcttc
gccaagttcaattggccagacagaaaggtgcgcatattcccttacctgattggccgagag
tctgcctttgctgataacatgaaatggatggcctgtgctaataaagggtatttcagtcag
atctccacactggctgatgtacaggaaaatgtgatgaggtatcttcatgttatgagtcgt
cctaaagtcatcgaccatgagcatgacacggtctggacagaggcctacgtggacagcact
ctctcccaggcacacaagtccagaaacaagaagggccctagcctgatgaccactgtggcc
atgcctgtgttcagcaccaagaacgagacgaagaaccagggtattctcctaggggtagtg
ggcacagacattcctcttcaggaactcatgaagatcatccctaaacacatgctgggtatc
cacggttacgcgtttgccatcacaaacaacggcttcatcctgacccatccggacctaagg
ccactgtaccaggagggccagaagaggaggaagcccaactacagcagtgtggacctgtca
gaagtggagtgggaggacaaggatgactttctgcgtaatgccatggtcaacaggaagact
gggacattctccatggaggtgaagaagacagtggacaaagggaaaagactcctgaagatg
cacaatgactacttctacactgaagtcaagggaactcccttcagtgtcggagtagctttg
tccagaggccatggcaaattcttcttcaggggaaacgtctcagtggaagcagggctcctt
gacctggaacagccagatgttgcgctggcagatgaatggacgtattgcaacacagacgag
caccatgagcaccgctccctctcccagatccaggccattaaactctacctgaccggacgc
aagacaaacatcaaatgtgacagggagctgatccaggaggtgttgtttgatgctgtggtc
acagccccactggaggcctactggaccggcctggccctcaacaagtcagagaattcagac
aaaggagtggagattgcttacctaggcacacgcactggcctctctagaaccaacctgttt
gttgtcccagagcacctatccaatcaagacttcctgatggcagaggataaggagggggtg
ttcaacgctgaccacttccctctgtggtacaagagagcagcggagcaggttcccggcacc
ttcgtctactctatcccctttggaggaaataagaataagagtgtggttttggccagcacc
gccatacagctgctggatgacaggaagtcgcctattgttgcttccgttgggattcagatg
aagctggatttctttcagaggaagttctggaccgctagcagacagtgtgctgctctggat
gggaagtgcaccatcagctgtgataatgaggacatcaagtgttaccttatagacaacaac
ggatttattctggtcacagaggactactctcagacggggctgttctttggagaggtggag
ggtgctgttatgaacaagctgcttctcatgggctccttcaaaaggatcactctgtatgac
taccaggctctctgtagagagtatgctggcagcagtgacagctcctgctctttatcacat
cccttctccattgtgaaatggctcctgaccgaacttgtcattttcctgctggagttcaac
ctttacagctggtggcatgttgatctctcagtcaaaggtcagtatggaaagaccatgatg
gtgccatgtgacacggagtaccctgccttcgtctctgagcgcaccatcaaagagaccacg
ggaaacatcgactgtgagggctgtgccagatcttttgtaattcagcaaattcctagtagt
aacctcttcatggtcgtcgtggacaacaagtgtgactgcagttctgcccccctggtttcc
atggatcccatcgagattatgtacaatgagtctctgaaatgtgataggctgaagtttcag
aaggacagaaagcggccagaatcgtgtcatcctttccatcccgaggagaatgccatggag
tgtggaagagcagcaggcctatctgcccccctcacagcagcactgctccccctactggcc
actctcattagcaggtga
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