Coregonus clupeaformis (lake whitefish): 121575426
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Entry
121575426 CDS
T08357
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121575426
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121575426
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121575426
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121575426
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121575426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Usp-48
DUF4780
sCache_2
Motif
Other DBs
NCBI-GeneID:
121575426
NCBI-ProteinID:
XP_041744475
LinkDB
All DBs
Position
10:48273958..48298113
Genome browser
AA seq
1052 aa
AA seq
DB search
MAPRVQLEKAAWRWVESVRPEDIQREHIEIAYRICVPACKRGACRRNCKGNPNCLVGIGE
HAWLGEIDENTFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRTLYLC
QNARAEEHNMDSDYEPRSICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKNPNLQNVIQQQFCGQMSYFTVCNQCGRASPLPSRFYELELNIQG
HKNLTECVTEFLKEEKLDGDNRYFCESCQSKQNATRRIKLHSLPRVLNLQLMRFVFDRQT
GHKKKLNTFISFPEQLDMGPFLEEKEDEKCVYELSAVLIHRGVSAYSGHYIAHVRDARTS
DWYKFNDEEIEKMEGKKLQLGLEEDIAETVKSQTRKPKCSKGYHCSRNAYMLVYKSQGEE
DTDPMETNVEVPGFLERLVDRDNRKFEEWCLEMADMRKQSVDKGKAKHEEVKELYELLPA
EDGQEYEFVPLEWLKKWLDDSTVTKEIDNGNFLCSHGKLHPDKVGEAKRISVNAAELLFN
KYGGGPRLDGSTLCEECVGQRCRVLRLKNQLAEDYKEVTNLVKGPPKSDEGYWAGKTSLR
SWRQLALEQLEEDEEETKHSDGKTNGEGPEITATKEYGPENQDGEEEEMKTFNEDILCRH
GGLSILESERRLVTEEVWSKLRVYFPKAPQFTQLQEPCQQCLRLEREGKENEALNRMMAS
EQKSSLLNLFQEKNRPTLTKWPQETDILYIVPLFFVDEWRRFIRRPAKTTPVSSVGNSLL
LCPHRGFMFTFDSMLKGDAQHIALLWPDEWEVISRHFLVDQPISICRISEATPNGSNVEY
TTQPELCRDCREGFIFQQQRDMREYAQATVYVRKVMDDKRLMKDAAPEMNVSGSEAEDER
EEPVAKVDGERDPDFSQSEDGAKRQKLSDGTIGAASSPAPMASGGKSGIRRSTRHRKLRG
EKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGRCLTDDSATLGSLGVIPESVICLK
ADEPIADFAAMDDVYQVCMPEEGFKGTGLLGH
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcgcgtacagcttgagaaagcagcctggcgctgggtcgagtcggtgagacca
gaggacatacaacgggaacatattgagatagcttaccgaatctgtgtaccggcgtgcaag
aggggagcatgcaggaggaattgcaaagggaacccaaattgtcttgtcggtattggggaa
catgcctggttgggagagatcgacgagaacaccttccacaatattgacgatccaaactcg
gagcgtcgggacaagaacacgtttgtgggtctgacaaacctgggcgctacgtgttacgtc
aacacctttctgcaggtgtggttccacaacctggaactgcgcaggaccctgtacctgtgt
cagaacgccagggcagaggagcacaacatggactcagactacgagcctcgcagcatatgt
gaacacctgcagtacctatttgcactgctgcagaacagcaacagaaggtacatcgaccca
tcagggctggtcaaggctctggggctggacacaggacaacagcaggacgcgcaagagttt
tccaagctcttcctctcgctattggaggacaccttatccaaacagaagaacccaaacctg
cagaatgtcatccagcagcagttctgtggacagatgtcttacttcactgtgtgtaaccag
tgtggtcgtgcttctcctctgccgtcccgattctacgaactggagctcaacatccagggc
cacaagaaccttacagaatgtgtcacagagttcctcaaggaggagaagttggatggtgac
aaccgctacttctgtgagagctgccagagcaaacagaacgccactcgacgcatcaaactg
cacagcctcccacgggtactcaacctgcagctcatgcgtttcgttttcgacagacaaact
ggtcacaagaagaagctcaacaccttcatcagtttcccagagcagctggacatgggcccg
tttctggaggaaaaagaagatgagaagtgtgtgtacgagctgagtgcagtcctgatccac
cgcggggtcagcgcctactcgggtcactacatcgcccacgtgcgagacgcccgcaccagc
gactggtacaagttcaacgacgaggagattgagaagatggagggcaagaagctacagctg
ggcttagaggaggacatcgccgagactgtgaagtcccagacccgtaagcccaagtgcagt
aaaggataccactgttccaggaacgcctacatgctggtgtacaagagccagggagaggag
gacactgacccaatggagaccaacgttgaggtgccaggctttctggagaggctggtggac
cgagacaacaggaagtttgaggagtggtgcctggaaatggccgacatgcgcaagcagagc
gttgacaagggcaaggccaagcacgaagaggtgaaggaactgtacgagcttttaccagcg
gaagatggccaagagtatgagtttgtgcctctggagtggctgaagaaatggttggatgac
tcgacggtcaccaaagaaatcgacaacggcaacttcctgtgttctcacggtaaactgcac
cccgacaaggtgggggaggccaagaggatctccgtcaacgcagcagagcttctcttcaac
aaatatggaggaggacccaggctagatggttcaactctctgtgaggaatgtgtggggcag
agatgcagagtgctgcggctaaagaaccagctggccgaggattacaaagaagtcaccaac
cttgtcaagggcccgcccaaaagtgatgaggggtactgggcgggcaagacgtctctgcgg
agctggagacagctggccttggagcagctggaggaggacgaggaggagaccaaacacagc
gatggtaaaaccaacggagagggaccagagatcactgctactaaagagtacggcccagag
aaccaggatggagaagaggaggagatgaagaccttcaacgaggacatcctctgtcggcac
ggcggtctgagtatcctggagagcgagcggcggctggtgactgaggaggtgtggtccaaa
ctgagggtgtacttccccaaagccccccagttcacccagctacaggagccctgtcagcag
tgcctgaggctggagcgagaggggaaagagaatgaggctctgaacaggatgatggcatca
gaacagaagagctccctactcaacctgttccaggagaagaacaggcccacactcaccaag
tggccacaggagacagatattctctacatagttcctctgttttttgtggacgagtggaga
aggttcatcaggaggcccgctaagaccacaccagtgtctagcgtagggaacagtttgctc
ctatgtccccatagaggcttcatgttcaccttcgactccatgttgaagggagacgcccaa
catatagctcttctctggcccgacgaatgggaggtgatcagcagacacttcctggttgat
cagccaatctccatctgccggatcagcgaggccacgcccaacggctccaatgtggagtac
accacccagcctgagctgtgtagggactgcagagaaggcttcattttccagcagcagagg
gatatgagagagtatgcacaagccacagtctacgtacgcaaggtcatggacgacaagagg
ttaatgaaggatgcagctcctgagatgaatgtgagtgggtcggaggcagaggatgagagg
gaggagcctgttgctaaggtggatggagagcgagaccctgacttcagccagtcagaggac
ggggcgaagcgtcagaagctgagtgacggcaccatcggtgctgcgtcaagtcccgcaccc
atggccagtggtggcaaatcggggattaggaggagcacgaggcacaggaagctccgggga
gagaaagcactcattgtctcagccaatcagacgctcaaggagctcaaaatacagatcatg
cacgccttctccgtggccccttttgatcagaacctatcgattgacggccggtgtctaacg
gacgactctgccaccctcggcagcctaggagtcatcccagagagcgtcatctgtctgaag
gctgatgaacccatagcagattttgccgcaatggatgatgtttatcaggtgtgtatgcct
gaagaaggatttaaaggcactgggcttcttggccactga
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