Coregonus clupeaformis (lake whitefish): 121575430
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Entry
121575430 CDS
T08357
Name
(RefSeq) F-box only protein 42
KO
K10317
F-box protein 42
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121575430
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121575430
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_5
Kelch_1
Kelch_6
Kelch_2
F-box-like
NANM
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
121575430
NCBI-ProteinID:
XP_041744481
LinkDB
All DBs
Position
10:48384056..48395835
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AA seq
708 aa
AA seq
DB search
MSRSSDSEDGYFVAMDTEEDGAGAGPVGMAQGEEEKMGTSREERDLEGFDEGERRMVELP
EEVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAYQCYHGFLRAVQDGNIQWESRTYPY
PGTPITQRFSHSACYYDSNQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYP
SPKAGATLVMYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPP
MAGHSSSVIGSTMVVFGGSLGARQMSNEVWVLDLEQWSWSKPTISGPSPHPRGGQSQIVI
GNETLLILGGCGGPNALLKDAWLLHMGAPPWTWQQLRVENDDHGAPELWCHPACRVGQCV
VVFSQAPSGRAPLSPSLNSRPSPISASPGPLGTEPPSLRSYSPVRSGAAGVVLGAVEEAP
CVNGRWGTLRPRPSARGGAREGSPGSSSQQPSPSQGPDSPPLPALHPLLNGSSPSPRTSP
AQAASPPSHPPVSSDYGWESPPSATHSLSAEVPSTNGVHTPPPGPGSPRTPPGAVSPAAL
RRGLEAVKNLSSSSVPSSSSSNPLSQGAATGVSGSGGGGASAGTSPSSSSSPPQVAADGH
TIPPIARRLGHHPPQSLNVGKPLYQSLNCKPMQMYVLDVSRAKADGLVSWRVYGNGTPAA
VTGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctcctcagacagtgaggatggatactttgttgccatggatacagaggaagat
ggtgcaggagcagggcctgttggaatggcacagggggaagaagagaagatggggaccagc
agagaagagagggacctagagggcttcgatgagggtgagaggagaatggtggagctgccg
gaggaagtcctagaatacatcctgtccttcctttcaccttaccaggagcacaagaccgct
gcactggtgtgtaaacagtggtaccgccttatcaaaggtgttgcatatcagtgttaccat
ggttttctgcgggccgtccaggatggcaacatccaatgggagagtcgaacatacccatat
cctggaacacccatcactcaacgcttctcacacagtgcatgctactatgactccaaccag
tccatgtatgtgtttgggggctgcactcagagtagctgcaacgctgccttcaatgacctg
tggagacttgacctcaacagcaaggagtggatccgccctttagcctcaggctcctatccg
tctcctaaagcgggggctaccctggtgatgtacaaagacctgctggtgctgtttggtgga
tggactcgccccagcccctacccactgcatcagccagagagattctttgacgagatccac
acatactccccctccaaaaactggtggaactgcatcgtgacgactcacggacccccgccc
atggccggtcactcctcctctgtcatagggagcaccatggtggtgtttggagggtcacta
ggggcgcgccaaatgagtaacgaggtgtgggttctggatctggaacaatggtcctggtcc
aagcccaccatctctggcccatccccccaccctcgaggaggccagtctcagattgtgatt
ggcaacgagactctgcttattctgggaggctgtggaggccctaatgcgctgctgaaggat
gcctggctcctgcacatgggtgccccaccctggacgtggcagcagctgagggtggagaac
gatgaccatggagccccagagctgtggtgccaccccgcctgcagggttgggcagtgtgtg
gtggtgttctcccaggctccgtctggccgtgcgcccctcagccccagcctgaactctcgg
ccctcacccatcagtgcctcgcccggtcccctgggcacagagcccccctccctgcgctcc
tattcccctgtgaggagcggagccgccggggtcgtcctaggggccgttgaggaggccccc
tgtgtgaacggccgctggggcacgctgagaccccgtccctcggctagagggggtgccaga
gagggtagccccggctcctcctctcagcagccatccccctcccaggggcctgacagcccg
cctctgcccgccctccatccactactcaacggctcgtccccctctccccggaccagccct
gcccaggctgcctccccgccctctcacccccctgtctcgtcagactacggctgggagtct
cccccttctgccacccactccctttctgctgaggtacccagcactaatggagtgcacaca
cctccccctggccctggctccccacgcactccaccgggggcagtgtcccccgctgccctg
agacggggcctggaggctgtcaaaaacctgtcttcttcatccgtgccatcttcatcgtcc
tcaaatccattgtctcaaggggctgctacaggagtaagtggaagcgggggaggaggggct
tcagcgggaacctccccctcctcatcctccagcccaccacaggttgccgctgacggacac
accatcccgccaatcgcacgccggcttggccaccacccgccccagagcctgaatgtgggc
aagcccctgtaccagtcactcaactgcaagcccatgcagatgtatgtactggacgtgtcc
cgagccaaagcggacggtcttgtctcctggagagtttacggtaacggcacccccgccgcc
gtcacgggccccccagagacgagccttcacacagtggtccaggggaggggcgagctcatc
attttcgggggcttgatggacaagaagcagaacgtgaagtactaccctaaaaccaacgcc
ttgtactttgtgcgcgctaagaggtaa
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