Coregonus clupeaformis (lake whitefish): 121575434
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Entry
121575434 CDS
T08357
Name
(RefSeq) peroxisome proliferator-activated receptor delta isoform X1
KO
K04504
peroxisome proliferator-activated receptor delta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03320
PPAR signaling pathway
cclu04148
Efferocytosis
cclu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121575434
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121575434
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121575434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121575434
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121575434
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121575434
Nuclear receptors [BR:
cclu03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
121575434
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121575434
NCBI-ProteinID:
XP_041744485
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Position
10:48140556..48187982
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AA seq
533 aa
AA seq
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MEGTRAAILAPVRSDAPRRDRKRRVGGPVRKGGVCQNRTTSPHGERTSDGEKEPESALKE
LKPRPLLKGLGKWETEGERGAEVSPEGEDGLCSWDMDSQDDEAQQQEKEEENQKQKKGSS
NSPAPSSSCTDLSQTSSPSLSDQLFLGREEGTGAGINVECRICGDKASGFHYGVHACEGC
KGFFRRTIRMKLEYERCERSCKIQKKSRNKCQYCRFQKCLLLGMSHDAIRYGRMPEAEKR
KLVAGLLAGDTTPTTNPNGSDLKSLAKQVNNAYLKNLNMTKKKARSILTGKNSASPVAYP
YPFVIHDMDSLHQAENGLVWNQLINGTPPNKEIGVHVFYRCQCTTVETVRELTEFAKSIP
GFVDLFLNDQVTLLKYGVHEAIFAMLPSLMNKDGLLVANGKGFVTREFLRSLRRPFSEIM
EPKFEFAVKFNALELDDSDLALFVAAIILCGDRPGLMNIKQVEEIQDSILQALDQHLLGN
HADSHYLFPKLLNKMADLRQLVTENAILVQKIKKTESETSLHPLLQEIYKDMY
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaccagggccgccatcttggcgccggtcagaagcgacgcccctcggcgggat
cggaagcggcgtgtcgggggtccggtaaggaaggggggggtctgccagaacaggaccacc
tccccacatggggagcgcacctcggacggcgagaaggagccggagtcagccttgaaggaa
ctgaaaccacgcccgctgctgaaggggctgggtaaatgggagactgagggggagcgagga
gcggaggtgtcacctgagggggaggatggcctttgctcctgggacatggactctcaggac
gacgaggcgcagcagcaggagaaagaggaggagaaccagaaacagaagaaggggagtagt
aacagccctgccccctccagcagctgcacagatctgtcccagacgtcgtctccatcgctg
tcggaccagctcttcctgggtcgagaggaagggactggggccgggatcaacgtggaatgt
cggatctgtggagacaaagcctcggggttccactacggagtacacgcctgtgaaggctgc
aaggggtttttccggcggaccatccgtatgaagctggagtatgagcgctgtgagcgcagc
tgtaagatccagaagaagagcaggaacaagtgccagtactgtcgcttccagaagtgcctg
ctgctaggcatgtcccatgatgcgatccggtacggccgcatgccggaggcggagaagaga
aagctggtggcgggcctcctggcgggagatacgactccgaccaccaaccccaacggctcg
gacctcaaatccctggccaagcaggtcaacaacgcctacctaaagaacctcaacatgacc
aagaagaaggctcgcagcatcctcaccggcaagaacagcgccagcccggtagcgtatcca
tatccctttgtgatccacgacatggactcgttgcaccaggctgagaatgggctggtgtgg
aaccagctgatcaacgggacgccgcccaacaaggagataggggtgcacgtgttctaccgc
tgccaatgcaccacggtggagacggtcagggagctcacggagttcgccaagagcatcccc
ggctttgtagacctcttcctcaacgaccaggtaacgctgttgaaatacggcgtgcacgag
gccatcttcgccatgcttccctcgctcatgaacaaggatgggctgctggtggccaacggg
aagggctttgtgacccgggagttcctgcgcagcctgcggcggccttttagcgagatcatg
gagcccaagtttgagtttgccgttaagttcaatgccctggagctggatgacagtgacctg
gccctgtttgtggccgccatcatcctctgtggagaccgtccggggctgatgaacatcaag
caggtggaggagattcaggacagcatcctgcaggccctggaccagcacctgctgggcaac
cacgctgactcacattacctcttccccaagctgctcaacaagatggccgacctgcgccag
ttggtcacagagaacgccatactggtccagaagattaagaagactgagtcagagacctca
cttcacccgctgctgcaggagatctacaaggacatgtactga
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