Coregonus clupeaformis (lake whitefish): 121575442
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Entry
121575442 CDS
T08357
Name
(RefSeq) WD repeat-containing protein 82
KO
K14962
COMPASS component SWD2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121575442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121575442
03036 Chromosome and associated proteins [BR:
cclu03036
]
121575442
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121575442
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
121575442
COMPASS/SET1 complex (yeast)
121575442
BRITE hierarchy
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
SMN_Tudor
Motif
Other DBs
NCBI-GeneID:
121575442
NCBI-ProteinID:
XP_041744505
LinkDB
All DBs
Position
10:complement(48595689..48599202)
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AA seq
314 aa
AA seq
DB search
MKITDSVLRSFRVARTFRENSQKVNCVDYSSNGESAISSSDDDSIVLYDCQEGKPIRTLY
SKKYGVDLIRYTHGDANTVVYSSNKLDDTIRYLSLTDNKYIRYFPGHTDRVVALSMSPVD
DTFISGSLDMTIRLWDLRSPNCQGLTNPLGKPVCSFDPEGLIFAAGVDSEAIKLYDLRSF
DKGPFASFETQFSRVCEWTGLKFSRDGKQILISTNGGAIRVLDAFNGSVLHTFSGYNNSK
GISLEACFTPDSDFVMIGSEDGRVHVWSTESGMKIAVLDGKHSGPINTLQFNPKYMTFAS
ACSNMAFWLPCVGD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaagattacggacagtgtgttgcgaagttttagggttgctaggacattccgggagaat
tcgcagaaagtcaactgtgtggactacagctcgaacggcgagagtgcaatatctagtagc
gacgacgactccattgttttatatgactgtcaggaaggaaaacccatacggaccctgtac
agtaagaagtacggagtagaccttatccggtatacacacggggatgccaacacagtggtc
tacagctccaacaaactagatgataccatccgatacctgtctctcactgacaacaagtac
atccgctacttccctgggcacactgatagggttgttgctctctccatgtcaccggtggat
gacacgttcatctcgggttcattggatatgaccatacgactctgggacctgcgctctcca
aactgtcagggtcttactaatcctttggggaagcctgtttgctcctttgatcccgagggc
ctgatattcgctgctggggtcgactctgaggcgattaaactgtatgacctccgctccttt
gacaagggccccttcgcctcctttgagactcagtttagccgcgtctgtgagtggactgga
ctgaagttcagcagggacgggaagcagattctcatctctaccaacgggggtgctattcgc
gtcctagacgccttcaatggatccgtgctgcacactttctcaggctacaacaacagtaaa
ggcatttcattggaggcctgcttcaccccagactcagactttgttatgattggttcagag
gatgggagggtccatgtgtggagtacagagagtgggatgaagatagcggttctggacggg
aagcattcaggaccaatcaacacactgcagtttaaccctaaatacatgacatttgccagc
gcctgctccaatatggcgttctggcttccctgtgtaggagactga
DBGET
integrated database retrieval system