Coregonus clupeaformis (lake whitefish): 121575502
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Entry
121575502 CDS
T08357
Name
(RefSeq) DDB1- and CUL4-associated factor 12 isoform X1
KO
K11803
DDB1- and CUL4-associated factor 12
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121575502
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121575502
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_DCAF12
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
WD40_like
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
121575502
NCBI-ProteinID:
XP_041744558
LinkDB
All DBs
Position
10:complement(37908921..37943941)
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AA seq
483 aa
AA seq
DB search
MARKTVSRKRKAGESKDQQQLGWCQSAYKRTRVSSSSRHAQQWWRSLRSVVCALRGREIR
PQQQHEWRLQRSLRGFAAGRLPGILKEQEFSLGCLNKVFASQWLNHRQVVCGTKCNTLFV
ADVLTGQITRIPMLKDRQGQGGGSGGIGGTIGAPFLGSGSGLDQQGCGIHAIELNPSGTL
LATGGDNPNSLAVYWLPTLDPVCVGDDGHNDWIFSIAWISDSMAVSGSRDGSMGLWEVSE
QVLSQAMRQQDEEGVPCYSHISHRALKDIPKEYTNPYNCKVRALAFNNNHKELGAVSLDG
YFHLWKAEQNLSKLLSTKLPHCKENVCLAYGQDWSVYAVGSQAHVSFLDPRQPTHNIKSV
SSRERGSEATRGIRSVSFYEHIVTVGTGQGSLLFYDIRAQRFLEDPSSPASGFRQRPGEG
ILKLTTGKGWLNHDETWRSYFSDINSFPNAVYTHCYDDSGTKLFVAGGPLCSGLHGNYAG
LWS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaaaacagttagcaggaaaagaaaggcaggggaatccaaggaccaacaacag
ttgggctggtgccagtcggcgtacaagcggacacgcgtgtcttcctcgtcccggcacgcc
cagcagtggtggcgtagtctgcgctcggtggtgtgcgcgctccggggccgcgagatccgg
cctcagcagcagcatgagtggcggctccagcgtagcctgcggggctttgctgccggccgc
ctcccgggcatcctgaaggagcaggagttctccctgggctgcctcaacaaggtgttcgcc
tcgcagtggctcaaccaccgccaggtggtgtgtggaaccaagtgcaatacgctatttgtg
gcagatgttctgacagggcagattacccgcattcccatgctgaaggaccggcagggccaa
ggagggggatccggggggattggggggacaataggggcccccttcctcggaagtggctcc
gggctggaccagcaaggctgtgggatccacgccatcgagctcaacccctccggcactctg
ctggccaccggcggagacaaccccaacagcctggctgtctactggctgcccaccctggac
cccgtctgcgtgggagacgatggccataatgactggatcttctccattgcatggatcagc
gacagcatggcggtgtctgggtcccgggacggttccatggggctgtgggaggtatccgaa
caggtgctgagccaggctatgagacagcaggatgaggagggggtcccctgctactctcac
atctcccaccgtgccctgaaggacatccccaaggaatacactaacccgtacaactgcaaa
gtgcgggccctggccttcaacaacaaccacaaggagcttggtgcagtgtccctggatggc
tattttcacctttggaaggcagagcaaaacttgagcaagctgctgtccacgaagctgcct
cactgcaaggagaatgtgtgtctggcgtacggtcaggactggtcggtgtacgcagtgggc
tctcaggcccatgtgtccttcctggacccccggcagcccactcacaacatcaaatcagtc
agttcccgggagagaggaagcgaggcaacacgaggcatccgctctgtgagtttctatgag
cacatagtgacagtgggcacgggacagggctctctgctcttctatgacatcagagcccag
aggttcttggaggacccttccagcccggccagcgggttccgtcagcgcccaggagagggg
atccttaaactcaccacagggaagggctggctgaatcacgacgagacgtggcggagctac
ttctcggacattaactcgttccccaacgctgtgtacacacactgctacgacgactctggc
accaagctgtttgtggccggcggaccgctgtgctcgggccttcacggcaactacgcaggc
ctctggagctag
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