Coregonus clupeaformis (lake whitefish): 121575514
Help
Entry
121575514 CDS
T08357
Name
(RefSeq) serine/arginine-rich splicing factor 2
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121575514
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121575514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121575514
Spliceosome [BR:
cclu03041
]
Common components
Common spliceosomal components
SR proteins
121575514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_8
Motif
Other DBs
NCBI-GeneID:
121575514
NCBI-ProteinID:
XP_041744604
LinkDB
All DBs
Position
1:complement(84231146..84236020)
Genome browser
AA seq
203 aa
AA seq
DB search
MSYGRPPPDVEGMSSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHFGRRGGGGPPRRHGGYGRRSR
SRSASPRRRRSSRSRSRSRSRGRDYSRSRSRSSSRSRSKSRTPRKSKSPSRSRSRSRTPA
SNRGSRSRSKSMPKSTEDNGIES
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgagctacggaaggcctccgcccgatgtcgagggtatgtcctcgctcaaagtggacaat
ctcacgtaccggacctcgcctgagaccctacgccgagttttcgagaagtatggccgggtg
ggagacgtgtacatcccacgtgatcggtacaccaaggagagccgcggtttcgcctttgtg
cggttccacgataagcgcgacgctgaagacgcgatggacgccatggatggggccttgctc
gacgggcgggaactgcgagtacagatggcgcgctatggccggccaccagactctcacttc
gggcgccgaggcggcggtggacccccaaggaggcatggaggctacggtcgcaggagcaga
agtcgttcggccagcccccgccggcgcagaagcagtcgttcccgaagcaggagccgcagc
cgtggccgtgactacagccgctcccggtctcgttcctcctctagatcccgttccaagtcc
cgcacaccccgcaagagcaagtccccgtcccgatcgaggtcccgcagccgcaccccggct
tccaacagagggtcaaggtcgaggtccaagagcatgcccaaatccaccgaggacaacgga
atcgagtcttag
DBGET
integrated database retrieval system
