Coregonus clupeaformis (lake whitefish): 121575525 Help Entry 121575525         CDS       T08357                                  Name (RefSeq) plexin-A1 isoform X1   KO K06820   plexin A Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04517   IgSF CAM signaling Brite KEGG Orthology (KO) [BR:cclu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     121575525 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Plexin_cytopl TIG Plexin_RBD TIG_2 Sema TIG_plexin PSI PSI_PlexinA-B PSI_integrin Motif Other DBs NCBI-GeneID:  121575525 NCBI-ProteinID:  XP_041744614 LinkDB All DBs Position 10:52113405..52371135 Genome browser AA seq 1893 aa AA seqDB search MWPLPRSLAAPHLGNLLLLGVLVLLAGPSQTGGQPQAFKTFCPTDWGLTHLAIHNKTGEV YVGSVNWIFKLSSNLTKLRSHMTGPVVDNEKCYPPPSVQSCPHDLAQTSNVNKLLLIDYA QNRLIACGSTSQGICQFLRLDDLFKLGEPHHRKEHYLSSVAESGTMSGVIITSPHGPASK LFIGTPIDGKSEYFPTLSSRKLMANEENADMFSFVYQDEFVSSQLKIPSDTLSKFPAFDI YYIYSFSSEQFVYYLTMQLDTQLTSPDASGEQFFTSKIVRLCVDDPKFYSYVEFPIGCTK DGVEYRLVQDAYLSRPGKQLADSLEISEDEDILFTVFSQGQKNRAKPPKESALCLFTLRR IKEKIKERIQSCYRGEGRLSLPWLLNKELACINSPLQIDDNFCGQDFNQPLGGTSTIEGI PLFIDKDDGMTSVAAYDYRGNTVAFAGTRNGRVKKILVNSVSPTRPALLYENVVVSDGSS PILRDLLFSPDMQHIYTLSDKQVSRVPVESCEQYTTCGQCLGSKDPHCGWCVLHNVCSRK DRCERADEPQRFASDQRQCVELSIQPKNISVTMSEVQLVLETRNVPDLSAGVNCSFEGYV ETEGRIQGGRIYCLSPSARDVIPITRNKGDKRVVKLYLKSKETGKMFASVDFIFYNCSVH ASCLSCVNGSFPCHWCKYRHMCTQNANDCSFQEGLVNMSEDCPQILPSTQIYIPVGVTKP ITLAARNLPQPQSGQRNYECVFHVQGEEHKVTALRFNSTSIQCQKNSYNYEGNDISDLPV DLSVVWNGNFVIDNPYNIQAHLYKCPALRDSCGMCLKADPRFECGWCVQEKKCSLRQECA PLESSWMHATTGNSRCAHPKIIKLSPETGPRQGGTMLTITGENLGLQFKDIQTGVRIGKV ACTPVEAEYISAEQIVCKLADATGYRVQEAHVEVCVRDCTHTDYKAISPKAFTFVSPYFT RVQPSKGPLSGGTHITIEGSHLNAGSAVAVKIGLHNCSFERRSAREIVCVTPAGQTPGGT PVMVDINSAELRNPEVKFNYTEDPTILKIEPDWSIASGGTLLTITGTNLATIKEPKMRAK YGKAQSVNNCTVLNNTVMVCLAPSVAVSEKGFSETGSGPDEIGFIMDNVHTTLVVNETFS FYPDPVIEPLSSTGLLELKPSSPLILKGKNLIPAAPGNSRLNYTVLIGDTPCVLTLSESQ LLCEWPNLTGEHKVTVRVGGFEYSPGTLQIYSDSLLTLPTIIGIGGGGGLLLLVIIGVLI AYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDIHELTQELDGAGIPFLDYR TYAMRVLFPGIEDHPVLKEMEVRVQANVEKALTLFGQLLTKKHFLLTFIRTLEAQRSFSM RDRGNVASLVMTALQGEMEYATGVLKQLLSDLIDKNLESKNHPKLLLRRTESVAEKMLTN WFTFLLYKFLKECAGEPLFMLYCAIKQQMEKGPIDSITGEARYSLSEDKLIRQQIDYKTL TLHCVNPENENALEVTVKGLNCDTVTQVKEKLLDAVYKGSPYSQRPKAGDMDLEWRQGRM ARIILQDEDVTTKIDNDWKRLNTLAHYQVTDGSVIALMPKQNSAYNISNSSTFTKSLSRY ESMLRTASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHSDQREGDRGSKMVSEIYLTRL LATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHSISDSDVRHTWKSN CLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHKLGKDSPSNKLLYA KDIPNYKNWVERYYSDISRMPVISDQDMSAYLAEQSRLHLSQFNSMSALHEIYSYIVKYK DEILSALERDEQSRRQRLRSKLEQVIDTMALAS NT seq 5682 nt NT seq  +upstreamnt  +downstreamnt atgtggcccctaccaaggtcactcgctgcccctcacctggggaacttgctccttcttggg gtgctggtcctcttggcaggcccgtcacaaacaggaggccaaccccaggccttcaaaacc ttctgccctaccgattggggactgacacacctggccatccacaacaagacgggcgaggtc tatgtcggctcggtcaactggatcttcaagctctccagcaacctcaccaagttgcgaagc cacatgacgggacccgtggtggacaacgagaagtgctaccccccgcccagcgtccagtcc tgcccccacgacctggcccagaccagcaatgtcaacaagctgctgctcattgactacgcc cagaaccggctcatcgcctgcgggagcacctcccagggcatctgccagtttttaaggttg gacgacctgttcaagctgggagagccgcaccaccgtaaggagcactacctgtccagtgtg gccgagtccggcaccatgtccggggtcatcatcacctccccgcacggacctgccagcaag ctcttcatcggcacgcccatcgacggcaagtctgagtacttccccacgctctccagccgc aagctgatggccaatgaggagaacgccgacatgttcagcttcgtctaccaggacgagttt gtctcctcgcagctaaagatcccttcggacactctcagcaaattccctgccttcgacatc tattacatctacagcttcagcagcgagcagtttgtctactacctgaccatgcagctggac actcaactcacctcgcccgacgcctccggcgaacagttcttcacctccaagatcgtccgt ctctgcgtggacgaccccaagttctattcgtacgtggagttcccaattggctgcaccaag gatggtgtggagtaccgcctcgtccaggacgcctacctcagccggcccgggaagcagttg gccgactctttagaaatatcagaagatgaggacatcctgttcacagtcttctcccaaggc cagaaaaaccgggccaaaccgcccaaggagtcggccctgtgcctgttcacgctacgccgc atcaaggagaagatcaaggagcgcatccagtcctgctacaggggagagggaaggctgtca ctgccctggttgctcaacaaggagctggcctgcatcaactcgcctcttcagatcgacgac aacttctgcggccaggactttaaccagccgctgggtgggaccagcactatagaagggata ccgctcttcatcgacaaggatgacggcatgacctcggtggccgcctacgattatcgtggc aacactgtggccttcgccggcacgcgcaacggcagggtaaagaagatcctggtgaactct gtgagtcccacgcgtccagctctgctctatgagaacgtggtggtgagtgacggctccagc cccatcctccgagacttgctcttctccccggacatgcagcacatctacacactctccgac aaacaggtgagcagggtaccagtggagagctgtgagcagtacaccacctgtggccagtgc ctgggctccaaagacccccactgtggctggtgtgtccttcacaatgtgtgttcccgtaag gacaggtgtgagcgcgcagatgagccccagcggtttgcctctgaccagcgtcagtgtgtg gagctcagcatccagcccaaaaacatctccgtcaccatgtccgaagtgcagctggtgctg gagacgcgtaacgtccccgacctctctgcgggggtcaactgctccttcgagggctacgtg gagacggaggggcgcatccaggggggtcgcatctactgcctgtccccctcagcccgtgac gtcatccccatcacccgcaacaaaggggacaaacgcgtggtgaagctctacctcaagtcc aaggagacgggcaagatgttcgccagcgtggacttcatcttctacaactgcagtgtgcac gcgtcgtgcctatcgtgtgtgaacggctcgttcccttgccactggtgtaagtaccgtcac atgtgcacccagaacgccaacgactgctccttccaggagggcctcgtcaacatgtccgag gactgtccccagatcctgccctctacccaaatctacatccctgtgggcgtgaccaagccc atcaccctggccgcccgcaacctaccgcagccccagtctggccagaggaactacgagtgt gtgttccacgtgcagggagaggaacacaaagtcaccgctctgcgcttcaacagcaccagc atccagtgtcagaagaactcgtataactacgaaggtaatgacatcagtgacctgcccgtg gacctatcggtggtgtggaatggcaactttgtcatcgacaacccctacaacatccaagcc cacctgtataagtgccctgccctgagggacagctgtgggatgtgtctgaaggctgaccct aggttcgagtgtggctggtgcgtccaggagaagaagtgttccctgaggcaggagtgtgcc cccctggagagcagctggatgcacgccaccacgggcaacagtcgctgtgcccaccccaag atcattaagttgtctccagagacgggtcccagacaggggggaaccatgctgaccatcaca ggggagaacctgggtctgcagttcaaggacatccagacaggtgtccgtatcggcaaggtg gcctgcacccccgtggaggccgagtacatcagcgctgaacagatcgtgtgtaagctggct gatgcgacaggttaccgagtgcaagaggctcacgtggaagtgtgtgtgagggactgcaca cacactgactacaaagccatctcacccaaggccttcacttttgtgtctccctacttcacg cgtgtgcagccctccaaaggccccctctcggggggcacccacatcaccatcgaggggagc cacctcaatgcaggcagcgctgtggccgtcaagatcggcctccacaactgttccttcgag aggcggagtgccagggagatagtgtgtgtgaccccagcgggtcagactcctggcggtacc cccgtcatggtggacatcaactcagctgagctcaggaacccagaggtcaagttcaactac actgaggaccccaccatcctcaagatcgaacctgactggagtattgcaagtggcgggacg ctgttgaccatcactggcaccaacctggctaccatcaaagagcccaagatgagagccaag tacgggaaagcccaatctgttaacaactgcacagtgcttaacaacacggtgatggtgtgt ctggcgccctctgtggctgtctcggagaagggcttctcagagacgggcagcggtcccgat gagatcggcttcatcatggacaacgtgcacaccacactggtggtcaacgagactttcagc ttctacccggaccctgtgatagagccgcttagctccacgggcctgctggagctcaaaccc agctccccactcatcctcaagggtaagaacctaatcccggcggcccctggtaactctcgt ctcaactacacagtgctgatcggagacacaccctgtgtcctcaccctgtcagagagccag ctgctctgtgagtggcccaacctcaccggagaacacaaagtcaccgtgcgagtggggggc tttgagtactcccccggtaccctccagatctactctgacagcctgcttaccctgcccacc atcatcggcatcggagggggcggtggcctgctcctattggtcatcatcggcgtgctcatc gcttacaagaggaagtcgcgggacgccgaccgcacgctgaaacgcctgcagctccaaatg gacaacctggagtcccgggtggcgctggagtgcaaggaagcctttgcggagctgcagaca gacatccatgagctgacccaggagctggatggagctggcatccccttcctggactacaga acctacgccatgagggtcctctttcccggtatcgaggaccaccccgtgctcaaggagatg gaggtacgggttcaggccaatgtcgagaaggctctcaccctgttcggccagctgctcacc aagaagcacttcctcttgaccttcatccgcacgctagaagctcaacgctccttctccatg cgtgaccgcggcaacgtggcgtcgctggtcatgactgctctccagggcgagatggagtat gccacaggggtgttaaaacagcttctctcagatctcatcgacaagaacctggagagcaag aaccaccccaagctgctgttgagaagaactgagtcggttgctgagaagatgctcaccaac tggttcacattcctcctctacaagttcctcaaggagtgtgctggcgagcccctgttcatg ctgtactgtgccatcaagcagcagatggagaaggggcctatagactccatcactggagag gcacgctactcactcagcgaggacaagctcatcagacagcagattgactacaagaccttg accctgcactgtgtgaacccggagaacgagaatgccctggaggtgacggtgaaggggctg aactgtgacacggtgactcaggtgaaggagaagttgctggatgcagtgtacaagggcagt ccctactcccagagacccaaggctggagacatggacctagagtggcgtcagggcaggatg gcccggatcatcctccaggatgaggacgtcaccaccaagatagacaacgactggaagaga ctcaacacactggcccactaccaggtgacagatggctcagtgatcgccctgatgcccaag cagaactctgcctacaacatctccaactcctccaccttcacaaagtccctcagcagatac gagagtatgttgaggacggccagtagtccagacagcctgcgctcccgcacccccatgatc acgcccgacctggagagtggcaccaagctgtggcacctggtcaagaaccacgaccactcg gaccagcgcgagggtgaccgcggcagcaagatggtttctgagatctacctgacccgcctg ctcgcaaccaagggtacgttgcagaagtttgtggacgacctgtttgagactatcttcagc acggcccaccgaggcagcgccctgcctctcgccatcaagtacatgtttgacttcctggac gagcaggccgacaagcactccatttccgactcagacgtacggcacacgtggaagagcaac tgtcttcctctgaggttctgggtgaacgtgatcaagaacccccagtttgtgtttgacatc cacaagaacagcatcacagacgcctgtctgtctgtggtggcccagaccttcatggactcc tgctccacctcagaacacaagctcggcaaagactcaccctccaacaagctgctctacgct aaagacattcccaactacaaaaactgggtggaacggtactattcagacatctcgcggatg cccgtcatcagtgaccaggatatgagtgcgtacctggcggagcagtcgcggctccacctc agccagttcaacagcatgagcgccctgcacgagatctactcctacatagtcaagtacaag gatgagatcctgtcggctctggagagggacgagcagtcgcggaggcagagactcaggagc aagctggagcaggtcattgacacaatggccttggccagctga

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