Coregonus clupeaformis (lake whitefish): 121575582
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Entry
121575582 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNF182-like
KO
K11983
E3 ubiquitin-protein ligase RNF182 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121575582
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121575582
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121575582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_5
zf-RING_2
zf-C3HC4
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_2
Prok-RING_4
zf-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
121575582
NCBI-ProteinID:
XP_045079227
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All DBs
Position
10:56081688..56119040
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AA seq
268 aa
AA seq
DB search
MSQKLEKLDLEAEQHCQPLVYTVEELECKICYNRYDMRTRKPKVLGCLHRVCAKCLKKIV
ENSSPSIVSCPFCRHETHVPYEEIWLLQDDSNILAILTYQDRARKSGGSITPGGEVLLTP
SSLSGGGENACGGGSGGDCLTTGEQSHSSSDCLVITIMEVAGESQSSVSMSMLNMVRLYR
PASLASLPCHLPVQKCGAWTLRNFPSFLIGVLCLIYFSSLPLGIYLLMIQQLNLGIILVS
LVPSTLVLCVFYGFCQCLCHEIMQSIAT
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaagttggagaagttggacttggaggcagagcagcactgccagcctctggtc
tacaccgtggaggagctggagtgcaagatttgctataaccgctacgacatgcgcacccgc
aagcccaaggtgctgggctgcctccaccgcgtctgcgccaaatgcctgaagaagattgtg
gagaactcgtcccccagcatcgtcagctgccccttctgccgccacgagacacacgtgccc
tacgaggagatctggttgctgcaggacgacagcaacatcctggcaatcctcacctatcag
gaccgggccaggaagagtggcggttccatcacccctggcggggaggtgctgctcacccca
agcagcctgagcggaggtggagagaacgcctgtggtggtggttctgggggtgactgcctc
acaaccggcgagcagtcgcatagttcctccgattgcctggtcatcaccatcatggaggtg
gcgggcgaatcgcagtcatcggtctccatgagcatgctcaatatggtgcgcctgtatcgg
cctgccagcctggcctcactgccctgccacctgcccgtgcagaagtgcggcgcgtggacc
ttgcgcaacttccccagcttcctcatcggcgtcctgtgtctgatctacttctcgtcgctt
ccgctgggcatctacctgctgatgatccagcagctcaacctgggcatcatcctggtcagc
ctggtgccctccaccctagttctgtgtgtgttctacggcttttgtcaatgcctttgccat
gagatcatgcagtccatagccacatag
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