Coregonus clupeaformis (lake whitefish): 121575653
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Entry
121575653 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-like-conjugating enzyme ATG3
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04136
Autophagy - other
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121575653
04136 Autophagy - other
121575653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121575653
04121 Ubiquitin system [BR:
cclu04121
]
121575653
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121575653
Membrane trafficking [BR:
cclu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
121575653
Ubiquitin system [BR:
cclu04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
121575653
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121575653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Med13_N
Motif
Other DBs
NCBI-GeneID:
121575653
NCBI-ProteinID:
XP_045066662
LinkDB
All DBs
Position
35:complement(41726643..41731533)
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AA seq
318 aa
AA seq
DB search
MQNAINSVKGTALGVAEFFTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWVSGEE
EKVKPYLPKDKQFLLTRNVPCYKRCKQMEYCDELEAIIEEDDGDGGWVDTYHNSGVGGVT
EAVREISLDNKDNMNMNVNSGASGNGDDDEDEGEAADMEEYEESGLLETDEATLDTSKMV
DLSKSKTGEAGNDDILQTRTYDLYITYDKYYQTPRLWLFGYDEDRQPLTVDQMYEDISQD
HVKKTVTIENHPHLPPPAMCSVHPCRHAEVMKRIIETVAEGEENLEFIASFKYLLIFLKF
VQAVIPTIEYDYTRHFTM
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgccattaattccgtaaaaggcacggcccttggtgtggccgagtttttcact
ccagtactgaaggaatccaaattcaaggagactggagttatcactccagaagagtttgta
gctgctggagatcaccttgttcatcactgccccacatggaaatgggtgtctggggaagag
gagaaggtgaagccatatttacccaaggataagcagttcctattaactcgcaatgttcct
tgttacaagcgctgtaaacagatggagtattgtgatgaactggaagccatcatagaggag
gatgacggcgatggaggatgggtcgacacctaccacaactcaggtgtagggggagttaca
gaagccgtgcgagaaatctcattggacaataaggacaacatgaacatgaacgtgaactct
ggtgctagtgggaacggtgatgatgatgaggatgaaggcgaggcagcagatatggaagag
tatgaggagagtggactactggaaacagatgaggccaccctggacaccagtaaaatggtg
gacttgtctaaatccaaaacgggagaggctgggaacgatgacatcctgcagactcgaacc
tatgacctctacatcacatatgacaaatattatcagactcctcgactctggctgtttgga
tacgatgaggacagacagcccctgacagtggatcagatgtacgaggacatcagccaggat
catgtgaagaaaacggtcaccatcgaaaatcacccccacctaccaccccctgccatgtgc
tctgtgcatccctgcagacatgctgaagtgatgaaaaggataatcgagaccgtggcggaa
ggggaggagaacttggagttcatagcatcctttaagtatctgttgattttcttgaagttt
gtccaagccgtcatccccacgatagaatacgactacacaaggcacttcaccatgtag
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