Coregonus clupeaformis (lake whitefish): 121575690 Help Entry 121575690         CDS       T08357                                  Name (RefSeq) cholesterol transporter ABCA5   KO K05648   ATP-binding cassette, subfamily A (ABC1), member 5 Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu02010   ABC transporters Brite KEGG Orthology (KO) [BR:cclu00001]  09130 Environmental Information Processing   09131 Membrane transport    02010 ABC transporters     121575690  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02000 Transporters [BR:cclu02000]     121575690 Transporters [BR:cclu02000]  ABC transporters, eukaryotic type   ABCA (ABC1) subfamily    ABCA5, 6, 8, 9, 10 subgroups     121575690 BRITE hierarchy Motif Pfam:  ABC_tran ABC2_membrane_3 AAA_21 RsgA_GTPase AAA_29 AAA_23 MMR_HSR1 Motif Other DBs NCBI-GeneID:  121575690 NCBI-ProteinID:  XP_041744900 LinkDB All DBs Position 1:complement(85346569..85434248) Genome browser AA seq 1687 aa AA seqDB search MYFIPIAPSCGERPHSCPRQLKHAGSNVSMQPNIIRRDAGVWHQTKSLLYKNLLIKWRTK QQSLQELILPLLLLCLLILISTLNPHVYYGGISTMELEREDYHLLKGLGYTPINNATNHI MEEVAQEMHLQDRLEMFSSEEDLENASLYEPSGYVGVVFMGSTPTSYKLRFPYNQLPLPS DYTESIANCFASSVNCRAANYWYSGFIRLQTLIDAAIIQMQTKRSVWSEMDHLRVVMMGQ PGSVEVQKFPHALISIYLVLAFTPFITFLIVNVAAEKEHRLKDTMTMMGLYDSAFWLSWG LLYAALVTTMSILMSIIATYTALFPNSDFIIIFLLIFLYGISSIFFSFMLTPLFKKPKFA STVGSMLTVVFGCLSLFTVLMKDFPQPLVWVLCLLSPSAFSIGIAQVVYLEAQGDGAVFS TLANGPHPLYAPLLMLILDCILYLLLAVYLDQVLPGEFGMRRSLVYFLKPSYWSKRSKRY VEVSSVCETEVNGAPGVDESVEPVSPEFRGKEAIRINNIRKVYKEKDSIVEALRGLTFDI YEGQITALLGHSGAGKSTLMNILCGICPPTDGHASIYGSPVAEIAEGAEMKQLVGICPQF NIIFDVLTVEEHLRIFAAIKGILPSDIDNEVSKVLKDLDLEKIMDAQAKNLSGGQKRKLS VGIAILGDPKILLLDEPTAGMDPCSRHQVWSLLKSRRAGRVTVLSTHYMDEADILADRKA VISQGQLKCVGSSLYLKTKCGVGYHLRMSIGERCEVDSVTSLVKHHVPKAQLSRQQEAEL TFTLPFESMDTFSGLFSELDCRPDLGIINYGVSMTTLEDVFLRLEAEAEVDQADYSVFNQ EQVEDDGDASSLDDTDQRLLTFSDSKPEAVQGHALWRQQFSTVAWLHMLNMQRERKAFVY TLALFLVFLAAVLVLSLATGNIQIHAPERQFVPIYLLRPNQAPRKYTTSLLVQNSSGSDI SDFIHNLESQDIKVEMMKNTDYMSCAPHSAAINVTGSNKGFRYSVAFNSTTVHSLPMTVN VLSNAILRGLNGTQHINTWTKPFDYQIPDATSYALVYIEAIILGMLAAGMPAYFAMDHTR DREIKCRSTLRISGLVPSAYWCGQAAVDIPFYYLILTTMTSILFSFHTANLLTSSNVTAV ILCLIGFGPAMILFAYVVSFMFTRVQSNRDFFSVVSMMVCVVSASIVQLSFVNDNPGLTR ILHNTLCFFNPLYPLMGCLNSITKATFLPSLYEEDFLWKNLLIAVLSPYLQCILLLFMLR WLEIRYGGRTMKNDQFCRISSKTKAKVERNPEEGINEDEDVQMEKARVKEALTCQCCEEK PVVVVSNLRKQYKCQREGISLKKKRMVATKNISFCVRKGEVLGLLGPNGAGKSTIMHMLS GDTDPTAGQVLMGDYSTEFRPVDNPLEHIGYCPQVSPLWPRITLEEHLEIYAAIKGLRGQ DVPGIITRVVNALELKDHLHKQAKNLSAGIKRKLCFALSMLGNPQIVLLDEPSTGMDPKS KQRMWRAIRAAFKNRQRGAILTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQHLKGKYGRG YSLEVKLREELTGLQQVALLHKEIRRIFPHAARQESFATLMVYKIPMEDVKSLAKSFSQL ESAKQAFNFEEYNFSQSTLEQVFMEFAKEQENEEEEVGSLSTTFQWQRLRQDGPVPVNHP DSIVHQL NT seq 5064 nt NT seq  +upstreamnt  +downstreamnt atgtatttcatacctattgcgcccagctgtggagaacgtcctcattcatgccccagacag ttgaagcatgctggtagtaacgttagtatgcagcccaacataatcagaagagatgccgga gtctggcatcaaacgaaaagcctgctttacaagaatctactcatcaaatggaggactaaa caacagagtctgcaggagttgatcctgccgctgctgctgctgtgcctgctgattctgatc agcaccctgaacccccatgtctactatggaggcatcagtaccatggagctggagagggag gactaccacttactaaagggcctgggatacacccccattaacaatgccaccaatcacatc atggaggaggtggcccaggaaatgcacttgcaggatcgtctggagatgttctctagtgaa gaggatctggagaatgccagtctttatgagccctcaggctacgttggggtggtcttcatg ggcagcacacccacctcttacaagttgcgcttcccttacaaccagctgcccctccccagc gactacactgagtctattgccaactgttttgccagctcagtgaactgcagagcagctaac tactggtactctggcttcatccgtctccagactctcatcgacgctgccatcattcagatg cagaccaagcggtcggtgtggagtgagatggaccacctgcgtgtggtgatgatgggccag ccagggtcagttgaggtccagaagttcccccacgccctcatctccatctacctggtgctg gccttcacacccttcatcaccttcctcatcgtcaacgtggcagcagagaaggaacacagg ctcaaagacaccatgaccatgatgggtctctacgactctgccttctggctatcgtggggc ctgctgtatgcagctctggtcaccaccatgtccatcctcatgtccatcatcgctacctac acagccctcttccccaacagtgacttcatcatcatcttcctcctcatcttcctctacggc atctcctctatcttcttctccttcatgctgacccctctgtttaagaagcctaagtttgcc agtacggtgggctcaatgctgactgtggtgttcggctgcctgtccctgttcactgtcctg atgaaggactttccccagccgctggtctgggttctctgtctgctgtcccccagcgcattc tccatcggcatcgcccaggtggtgtacctggaggcccagggggacggagctgtgttctct accctggccaacggcccccatcccctctacgccccccttctcatgctgatcctggactgt atactctacctgctgctggctgtctacctggaccaggtcctaccaggtgagtttggcatg cggcgctccctggtctacttcctaaagccgtcctattggtccaagcgcagtaagcgctac gtcgaggtgagctctgtgtgcgagacggaggtgaacggggccccaggagtggatgagtct gtggagcccgtctctccggagttcagggggaaagaagccatccgcattaacaacatccgc aaggtgtacaaagagaaggacagcatcgtggaagctctgaggggcttgacctttgacatc tacgagggtcagatcacggccctcctgggccacagcggagcggggaagtccactctgatg aacatcctgtgtgggatctgccctccgaccgacggccacgcctccatctacggctccccg gtggcagagatcgctgagggggcagagatgaagcagctggttggcatctgccctcagttc aacatcatctttgacgtgctgactgtagaagagcacctgaggatattcgctgccattaaa gggattctcccctctgacattgacaatgaggtctccaaggtgctgaaggatctagatctg gagaagatcatggacgcccaggctaagaacctgagtggaggccagaagaggaaactgtct gtgggcatagccattctgggagaccccaagatcctgctcctggatgagcctacggctggt atggacccctgttccagacaccaggtgtggtctctgctgaagagtcgcagagcaggcaga gtcacagtgctcagcacacattacatggacgaggcagacatactggctgaccgcaaagct gtgatctctcagggccaactcaagtgtgttggttcttccctatacctcaagaccaagtgt ggagtaggataccacctcagaatgtctattggtgaacggtgcgaggtggatagtgtcacc tcattggtcaagcaccacgtccccaaggcgcagttgtcacggcaacaagaggctgagctg acgttcaccctccctttcgaaagcatggacaccttttcaggattgttctcagaactagac tgcaggccagacctgggcatcatcaactacggggtgtccatgacaacgctggaggacgtg tttctgcgtctggaggctgaggctgaggtggaccaggctgactacagtgtgttcaaccag gagcaggttgaggatgatggtgatgcatcctctctggacgacactgaccaaagactactg accttctctgacagcaagccagaggcggtccagggccatgctctttggaggcagcagttc agcaccgtggcctggctacacatgctcaacatgcagagagagaggaaggcctttgtctac actctggcattgttcctggtcttcctagctgctgtgctagtgttgtctctggctacgggg aacatccagatccacgctccagaacgccagtttgtccctatctacctgctgagaccgaac caggccccccggaaatacaccaccagtctactggtccagaactcatcaggctcagatatc tccgacttcatccataacctggaatctcaggacatcaaggtagagatgatgaagaacaca gactacatgtcctgtgctcctcacagcgcagccatcaacgtcaccggatccaacaagggt tttagatacagtgtagcgttcaacagtactaccgtccactctttgcccatgacagtcaac gtcctcagtaacgccatcctacgaggcctcaacggcacacaacacatcaacacctggacc aagcccttcgactatcaaattcccgacgccacgtcctatgctctggtctacatcgaggct atcatactgggaatgctagctgcgggcatgcctgcctacttcgccatggaccacacccga gacagagagataaagtgccgttcaacgctgcgtatctctggcctggtcccgtctgcgtac tggtgtggtcaggctgcggtggacatccccttctactacctcatactgaccaccatgacc agcatcctcttctccttccatactgccaacctgctcacctccagcaacgtcaccgcagtg atcctgtgtctgataggttttggtccagctatgatcctgttcgcctatgtggtgtctttc atgttcacacgcgtccagagtaacagagacttcttctctgtggtctccatgatggtgtgt gtggtgtctgcctccatcgtccagctgtcatttgtgaacgacaaccctgggctgacaagg atcctccacaatacactatgtttcttcaaccctctctaccccttaatgggctgccttaac tctatcaccaaggccacctttctgccctccctctatgaagaggacttcctctggaagaac ctgctcattgccgtcctatctccctatctgcagtgcatcctgctgctgttcatgctgcgc tggttggagatccgctacggagggaggaccatgaagaatgaccagttctgcaggatctct tccaagactaaggctaaagtggagcgtaacccggaggaggggatcaacgaggatgaggat gttcagatggaaaaggctcgggtgaaggaggccctcacctgccagtgctgtgaggagaaa ccagtagtggtggtgagtaacttgaggaagcagtataaatgtcaacgggaaggcatctct ctcaagaagaagaggatggtagccaccaagaacatctccttctgcgtacgcaaaggtgag gtgcttggactgttggggcccaacggagcagggaaaagcaccatcatgcatatgttgtct ggagacacagacccaaccgctggacaggtcctgatgggggactacagtacagagttccgt ccagtagacaaccccctggagcatataggctactgtccccaggtcagccctctgtggccc cgcatcaccctggaggaacacctggagatctacgctgccatcaagggcctccgcggacag gacgtccctggcatcatcacacgtgtggtgaatgctctggagctgaaggaccacctccac aagcaagcaaagaacctatcagctgggatcaagaggaagttgtgctttgctctcagcatg ttggggaaccctcagatagttctgctggatgagccttctacagggatggaccccaagtcc aaacaacgcatgtggagggctatccgggcagcgtttaagaaccgccagcgtggggccatt ctgaccactcactacatggaggaggctgaggctgtgtgtgaccgcgtggccatcatggtg tcagggcagctcaggtgtattgggtctatccagcacctgaaggggaagtatgggcgtggc tacagcctggaagtgaagctgagagaggagctgacggggctccagcaggtggcactgctc cacaaggagatccgacgaatctttcctcacgctgcaagacaggagagctttgccacgctg atggtttacaagatccccatggaggatgtcaagtcactggccaagtccttctctcagcta gagagtgctaagcaagccttcaactttgaagagtacaacttttcacaatctaccttagag caggtcttcatggagtttgctaaggagcaggagaacgaggaggaggaggtgggttccctc agcaccacgttccagtggcagcggctccgccaggatggccctgtgcctgtcaaccaccca gacagcatcgtgcaccagctgtga

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