Coregonus clupeaformis (lake whitefish): 121575756
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Entry
121575756 CDS
T08357
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121575756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121575756
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121575756
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
DUF445
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
121575756
NCBI-ProteinID:
XP_041744989
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All DBs
Position
10:complement(35091251..35093155)
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AA seq
198 aa
AA seq
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MCQSHTYSLNKETSTTQRSSHGTYNRFSLIYCNEHRTLTNKPVVEKLRRDRINNRIGQLK
SLLGPEILTQQPDSKLEKADILEMTLCFLRRQQQNQPVSSCLAPVNQGYSRCVQEIVHFL
SKDEVKTQSQRRLLSHFQSLHPSSDKNRRESDLPQLSSPAQHSISKENNPVNSTLWRPWK
SPTDWRSTLNQTQWNMLV
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcagtctcacacctattctctcaacaaagagaccagtacaacacagagatccagc
catggcacctacaatcgattcagcttgatctactgtaatgagcaccggactctgaccaac
aagccagtggttgaaaagttacgcagagatcgtatcaacaacagaattgggcagctcaag
tctctcttgggtccagagatcctcacccagcagccagactccaagctggagaaagccgac
atcttggagatgacactttgcttcctgagacgacagcaacagaaccagccagtgagctcc
tgcttggcacctgtcaatcagggatactccaggtgtgtccaagagattgtgcacttcctg
tccaaggatgaggtgaagacacagtcccagagaagactgctgagccacttccagagcctg
catccatcctctgataagaacaggagggagagtgacctgcctcagttgagctccccagcc
cagcacagcatcagcaaagagaataatccagtcaacagcacactctggaggccctggaag
agtcctacagactggaggtccactctcaatcaaactcaatggaatatgttggtctaa
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