Coregonus clupeaformis (lake whitefish): 121575797
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Entry
121575797 CDS
T08357
Name
(RefSeq) vesicle-trafficking protein SEC22b-B-like
KO
K08517
vesicle transport protein SEC22
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130
SNARE interactions in vesicular transport
cclu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121575797
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121575797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121575797
Membrane trafficking [BR:
cclu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
121575797
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
121575797
NCBI-ProteinID:
XP_041745022
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Position
10:34129303..34130261
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AA seq
214 aa
AA seq
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MVLLTMIARLADGLPLAASMQEDEQLSRDLQQYQSQAKQLFRKLNDQSPTRCTLEAGSMS
FHYVIEKGVVYLVLSEASFPKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFDTYIQ
KTKKSYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKY
RSDAKYLNTRSTYAKLAAGGVFLMLIVYVRFWWL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctgacaatgatcgctcggttggcggatggactgccgctggccgcatcaatg
caagaggacgaacagttgagtcgagacctgcaacagtaccagagccaggctaaacagctg
tttaggaaactcaatgaccagagtcccacacgttgcacattagaggctggctccatgtcc
ttccactacgtcatagaaaaaggagtagtctacctagtgctgtctgaagcaagctttccc
aaaaaacttgcctttgcttacctggaagacctgcaggcagagttccatgaacagcacggg
aagaaagtccccactgtgtctcgaccgtactccttcattgagtttgacacctacattcag
aagaccaagaagtcgtacatagacagccgagcccgtaggaacctgggcagcatcaacaca
gagctgcaggatgtccagaggatcatggtggccaacattgaggaagtgttgcaacgaggg
gaggccttgtctgctctggactccaaggccagtaatctgtccagcctgtcaaagaagtac
agaagtgatgccaagtacctgaacactcgctccacctacgctaagctggccgccggaggg
gtcttccttatgctcattgtctacgtccgcttctggtggctctga
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