Coregonus clupeaformis (lake whitefish): 121575803
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Entry
121575803 CDS
T08357
Name
(RefSeq) RPE-retinal G protein-coupled receptor
KO
K04254
retinal G protein coupled receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121575803
04030 G protein-coupled receptors [BR:
cclu04030
]
121575803
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121575803
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Vision
Opsin
121575803
BRITE hierarchy
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
121575803
NCBI-ProteinID:
XP_041745059
LinkDB
All DBs
Position
1:complement(6518363..6525441)
Genome browser
AA seq
296 aa
AA seq
DB search
MAAYTLPEGFSDFDMFAFGSALLVGGLLGFFLNAISILAYISVKQMRTPSNFLVFNLAVA
DIMLNITGLIAAYASLTYRHWPWGQDGCSNHAFMGMTAVLASISFLATIAWDRYHQYVTN
QKLFWSTAWTFSIVIWGMAIFWAAVPLAGWGVYDFEPMRTCCTLDYTKGDKDYMTYMGAL
TVFYLIFPAYVMKSNYDAIHAYFKKIHKHRWNTSVPLRVLLFCWGPYEIMCIYACFDNAK
LVSPKLRMLLPVLAKMNPIFNAWLYSFGNEFYRGGVWQFLTSQKFTEPVVVKLKGR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatacacattaccggagggtttctccgattttgacatgtttgcattcggttca
gcgcttcttgttgggggtcttcttggattcttcctcaacgccatttcaatattggcctat
attagcgtaaagcaaatgcgaactcccagtaattttcttgtgtttaaccttgctgtggct
gacattatgctcaatataactggcctgatcgctgcatacgccagcttaacttatagacac
tggccctggggccaagatggatgtagcaaccatgccttcatggggatgacagcagtcctg
gcctctatcagcttcctggctaccatcgcctgggacagatatcaccaatatgtcaccaat
cagaagctgttttggagcacggcctggactttttctatcgttatctgggggatggccatc
ttctgggcggccgtccctctggctggttggggagtttatgactttgagcccatgaggacc
tgctgcactctagactacaccaaaggagacaaggactacatgacctatatgggggcactg
actgtcttctaccttatcttccctgcttatgtcatgaagtccaactacgacgccattcac
gcatacttcaagaagatccacaagcacaggtggaacaccagtgtaccactgagggttctg
ttgttctgctggggaccctacgaaatcatgtgtatctacgcctgctttgacaatgccaaa
ctggtctctccaaagctgagaatgttgcttcctgttttggcgaaaatgaaccccattttc
aacgcgtggctctattcctttgggaatgagttctacagaggaggggtgtggcagttcctg
actagccagaagtttactgagccggtcgttgtgaagttaaaaggaagataa
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