Coregonus clupeaformis (lake whitefish): 121575837
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Entry
121575837 CDS
T08357
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 9
KO
K08624
a disintegrin and metalloproteinase with thrombospondin motifs 9 [EC:3.4.24.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121575837
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121575837
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
ADAMTS_CR_2
Reprolysin_5
TSP1_spondin
ADAMTS_CR_3
Reprolysin_3
Reprolysin_2
TSP1_CCN
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
121575837
NCBI-ProteinID:
XP_045078866
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All DBs
Position
10:complement(27488409..27533362)
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AA seq
1464 aa
AA seq
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MHVLFWGLGFLLFLPDVLNVVLSTERSLLNSRKAKVPKQLGAYEIVTPARVNEAGDNFPT
SVHFKRKRRSVDGVPGNSSDQWASPTIHFKISAFGQSYHLNLTLESGFIAPLYTVTVLGA
PTRGNITDFTLEEEAEEDTEYQHCFYKGHVNAQTEHTAVISLCSGLLGTFRSPEGEFFVE
PLHSYNGEHYEEEHTKPHIVYRKKAPKKEAAGEDTACDTSGHKHRHKRNRDKVRRHPMAS
SSSSGMLNDLESLSAGLTANPFSRSERESSRRPANDSSSDSVPHRRSKRFLSYPRFVEVM
VVADSKMVEHHGSNLQHYILTLMSIVSSIYKDPSIGNLINIVIVKLVIINNELDGPTISF
NAQTTLKNFCIWQQRQNHQDENHHSYHDTAILITRQDICRARDKCDTLGLAELGTVCDPY
RSCSISEDNGLSTAFTIAHELGHVFNMPHDDSNKCKEEGVKIQQHVMAPTLNHYTNPWMW
SKCSRKYITEFLDTGYGECLLDEPISRPYSLSQQLPGRIYNVNKQCELIFGPGTQVCPYM
VQCRRLWCTSPEGAQRGCRTQHMPWADGTECSPGKHCKHGQCITKEHDATPVEGAWGGWS
PFGSCSRTCGGGIKIGNRECNQPMPKNGGKYCVGRRMKFRSCNSEPCSKQKRDFREEQCA
AFDGRHFNINGLPPNVRWVPKYSGIQMKDRCKLFCRVAGSTAYYQLRDRVIDGTPCGPDT
NDICVQGLCRQAGCDHVLNSKARRDKCGVCGGDNSSCKTVAGTFNMVRYGYNEVVRIPSG
ATNIDVRQHSYSGKPEDDNYLAVSNSRGEYLLNGEFVVSMFKREIKLGNAIIEYSGSDHV
IERINCTDRIEEEIIVQVLSVGNLYNPDVRYSYNIPIEDKTQQFVWDAYGPWQECSRPCQ
GERKRKILCSRESDRVVVSDQRCHGAARPAMVTEPCNAECEIRWHVAQKSECTVPCGVGY
RTLEIYCAKLRRTDGKTQKVDERYCSSQRKPEDKESCHGDCNPAGWEYSSWSECSKSCGG
GSRRRAAVCGKSSEAESDESKCSQRDKLTTVQNCNEFLCPAWKTGDWSECPVTCGKGYKH
RQTWCQFAEDRRDDRFCDSASKPESVQTCQQQDCASWQVGPWGQCTTLCGPGYQMRAVKC
VVGSYGSVMDDTECNAATRPTDTQDCELAQCPVSHPVPPGTKVPSHLSHKTQWRFGSWTQ
CSATCGKGTRMRYVSCRDNQGGVAEDSACSHLAKPPARDGCTVVHCGQWKVLEWTSCSVS
CGQGTTTRQVVCLNLSDQIVDVVECDPDDRPATEQECAMSQCPFVRSSDPRPFPSPSGGV
RNNLPTAADGRSGGRTQAHQWRTGPWGACSSTCAGGFQRRVVVCQDENGYAANNCEDRSK
PIEQRSCESGPCPQWVYGNWGECTKPCGGGIKTRLVACQRPNGERFNDLSCEILDKPPDR
EQCNTQSCPSNPHWSTDPWSSVRS
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgctgttttggggactagggtttctgctatttctcccagacgttttgaatgta
gtgttatccacggagagatcgctattgaattcaagaaaagctaaagtgcctaagcagctt
ggcgcatacgagattgtaactccggcgcgagtgaatgaagccggtgacaactttcccacg
agcgtgcacttcaaaaggaaaaggcggagtgtggacggtgtccctggcaactcctccgat
caatgggcctctccaacaatccatttcaaaatatctgcgttcggacagagctatcacctc
aacctgacactcgagtccggatttatcgctccgctatacactgtgacagtactaggagca
cctaccagaggtaacataacggatttcaccctggaggaggaggcggaggaggatacggag
tatcagcactgcttctataaaggacatgtgaatgctcaaacggagcacaccgcagtcatc
agtctctgctctggattgcttggcactttcaggtcaccagaaggggagttttttgtggag
ccccttcacagctacaatggagagcactatgaagaagaacacaccaaacctcatattgtg
tacaggaagaaggcccccaagaaagaggcagccggggaggacactgcttgtgacacatca
ggacataaacacagacacaagaggaacagggacaaggtgaggagacatccgatggccagc
agcagcagcagcggcatgctgaatgacctggagagcctgtctgcaggcctgactgccaat
cccttctccagatcagagagagagagcagcagacggccggctaatgacagcagcagtgac
tcagtacctcacaggagatcaaagcgcttcctctcctatccccgctttgtagaagtcatg
gtggtggcagacagcaagatggtggaacatcacgggagcaaccttcagcactacattctc
acgttaatgtccatcgtgtcttccatctacaaggatcccagcatcggaaatctgattaac
attgtgattgtgaagttagtcataattaacaatgagctggatggccctaccatttccttc
aatgcacagaccactttaaagaacttctgtatctggcaacagaggcaaaatcaccaagat
gagaaccatcactcctaccacgacacagccattctcatcaccaggcaggacatctgccga
gcgcgggataagtgtgacactttagggcttgcagagctgggtacagtgtgtgatccatac
agaagttgcagtattagtgaggacaatggactcagcactgcgttcactatcgcccatgaa
ctaggccatgtattcaacatgccccatgatgacagcaacaagtgcaaagaggagggggtt
aaaatacagcagcatgtgatggcacccacactcaaccactacactaatccctggatgtgg
tccaagtgtagcaggaaatacatcacggagttccttgacacagggtatggcgagtgctta
cttgatgagcccatttctaggccatacagtctgtcgcagcagctgcctggacggatatac
aatgtcaataaacaatgtgaattgatatttgggccggggacacaggtgtgcccatatatg
gtccagtgccgcaggctgtggtgcaccagcccagagggggcccagaggggctgcaggacc
caacacatgccctgggccgacggaacagagtgctctccaggaaagcactgtaaacatggc
cagtgcattaccaaggagcatgatgccacgcccgtggagggggcgtggggaggctggtct
ccgtttggctcctgctcgcggacgtgtggcgggggcatcaaaatcggcaaccgcgagtgc
aaccaacccatgcccaagaacggggggaagtactgtgtggggcgcaggatgaagttccgc
tcgtgtaactcagagccctgctccaagcagaagagagacttcagagaggagcagtgtgcg
gccttcgatggccggcacttcaacatcaacggtctacctcctaatgtgcgctgggtaccc
aagtacagcggaattcagatgaaggatcgctgtaagctgttttgcagggtggctggcagc
accgcctactatcagctcagggatcgggtcatcgacggcacgccatgtggccccgacacc
aatgacatctgtgtgcagggcctgtgcaggcaagcgggatgtgaccatgtgttgaattcc
aaggcgaggagagataagtgtggtgtgtgtggcggtgacaactcctcgtgcaagaccgtg
gcaggcaccttcaacatggtgcgatacgggtacaacgaagtggtgagaatacccagtggt
gctacaaatattgatgtgcgtcaacacagctactcagggaaaccagaggacgataactac
ctcgctgtttcaaacagccgtggggagtatctgctcaatggcgagtttgtggttagcatg
tttaaaagggaaatcaaactgggcaacgccatcatcgagtacagcggatctgaccacgtc
atcgagagaatcaattgcactgaccgtatcgaagaggagatcattgtccaggtgctttct
gtaggtaacttgtacaacccagacgtcaggtactcctataacatccccatcgaggataaa
acccagcagttcgtctgggacgcctacgggccctggcaggagtgcagcaggccctgccaa
ggagagcgtaagaggaagatcctgtgtagtagagagtcggaccgtgtggtggtctcagac
cagagatgccatggggctgccagaccagccatggtcacagaaccctgcaacgcagagtgt
gaaatcaggtggcatgtggcgcagaagagtgagtgtacagtcccgtgtggagtgggatat
cgtacgctggagatctattgcgccaaactcagacgtaccgacggaaagacccagaaggtg
gacgagcgttactgcagcagtcaacgtaaacctgaggacaaggagagttgccatggagac
tgtaacccggccggttgggagtactcttcttggtcagagtgctccaaaagctgtggcgga
gggtcccggcgtcgtgcggccgtgtgtgggaagtcctctgaggcagaaagtgatgagagt
aagtgcagccagcgagacaagctcaccaccgtccagaactgcaatgagttcctgtgtccc
gcgtggaagaccggagactggtctgagtgcccggtgacgtgtgggaaagggtacaagcac
cggcagacatggtgccagtttgcagaggatcgacgggacgaccgcttctgtgactctgcg
tccaagcctgagtcggtccagacgtgtcagcagcaggactgtgcctcgtggcaggtcgga
ccttggggacagtgcacaaccttgtgtggaccaggctaccagatgcgggcggtgaagtgc
gttgtggggtcatatgggtctgtcatggatgacactgaatgtaacgcggccacacggccc
actgacactcaggactgtgaactggcccagtgtcctgtcagccacccggttccccctggg
accaaagtgccctcacacctctcacacaaaacccagtggaggttcggctcttggacacag
tgtagcgccacctgcggcaaagggacacggatgcgctacgttagttgccgtgacaaccag
ggtggggttgcggaggattctgcctgctcccacctggccaagcccccggccagggacggg
tgcactgtagtgcactgcggacagtggaaggtcctagaatggacatcatgctctgtatcc
tgcgggcaggggactaccactcgccaggtggtgtgtttgaacctcagtgaccagatagtg
gacgtggtggagtgtgaccctgacgaccgtccagccacagagcaggagtgtgccatgtcc
cagtgcccttttgtccgctccagtgatcctcgacccttcccctcgcccagcgggggcgtc
cgcaacaacctgcccacggctgccgacggacgtagcggaggacgaacccaggcccaccaa
tggaggacaggaccctggggagcgtgctcgagcacatgtgcgggtggcttccagaggcgt
gtggtggtgtgccaggatgagaatggttatgctgccaacaactgtgaagatcgctccaaa
cccatcgagcagcgctcctgtgagtccggaccctgtccacagtgggtctacgggaactgg
ggagagtgcaccaagccgtgtgggggaggaataaagacgcggctggtggcgtgtcagagg
cccaacggagagcgctttaacgatctgagctgtgagattctagacaaaccgcccgaccgt
gagcagtgcaatactcagtcgtgcccgtctaacccccactggagcacagacccatggagc
tcggtacgctcgtaa
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