Coregonus clupeaformis (lake whitefish): 121575841
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Entry
121575841 CDS
T08357
Symbol
magi1b
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1b isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121575841 (magi1b)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Serglycin
Motif
Other DBs
NCBI-GeneID:
121575841
NCBI-ProteinID:
XP_045079607
LinkDB
All DBs
Position
12:7187650..7408394
Genome browser
AA seq
1625 aa
AA seq
DB search
MSKVIQKKNHWTTKVNECAVLKDARGDLNVQLLGGAENGEFAYIGQINDDIVVYKNGKLT
EGELILEVENLSISGLPLYDVQTVIKNCMGPIRLKTVRQGNKLNKDLKHYLSQRFQKSSP
DHELQQTIRDNLYRHAVPCTTRLPRDREVPGVDYNFLPVEDFLALEKCGTLLEIGTYEGN
YYGTPKPPNQPPSGKVITSDALQDSLPGSQHSTPRRTKSYNEMQNAGIVPVDLEEDEELP
EMNSSITGDSSEPDERPSVRPYALRENAPSYGVINASSSTTDGSQQTHTHLSHPPTEEDP
LGPLADNWEMAYTENGEVYFIDHNTKTTSWIDPRCLNKPPKPLEECEDDEGVHTEEMDSE
LELPTGWEKIEDPVYGVYYVDHINRKTQYENPILEAKRRKQLEQQQPPEGERYIREWIED
ATLAGAPLASYTANHQETYRDTQAGPPLPPLIGPKRGKPFFTRNPAELKGTFINTKLRKS
HRGFGFTVVGGDEPDEFLQIKSLVLDGPAAVDGKMETGDVIVSVNDTCVLGYTHAQVVKV
FQSIQIGSMVNLELCRGYPLPFDPDDPNTSLVTSVAIVDKEPIIINGQESYDSPSSHGSQ
TGGPVNGLRESGPHSPSSAEVASNGSHGYPSDSVTLASSIATQPELITVHMEKGDKGFGF
TIADSPAGGGQRVKQIVDYPRCRGLKEGDIIVEVNKRNVQSMSHNQVVDLLSKCPKGSEV
TMLVQRGGGVAPAKKSPKLQLARKDSQNSSVHSVSSHRSTHTDSPVHLSLATPFCESAAP
PPPTQPLPGLPPQEPQADGTIQRKPDPFKVWAQSRSMYESRLPDFQEQDIFLWRKDTGYG
FRILGGNEPGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAVVGKSHQLVVQLMQQAA
KQGHVNLTVRRKTGYGGSKGEGEVPPSPASSHHSSTQAPSLTEEKRTPQGSQNSLNTVSS
SSGSTSGIGSGGGGGSGSTVVNNALQPYDVEIRRGENEGFGFVIVSSVSRPESGTTFAGN
ACVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLR
IIPGDESSNASLLTNAEKIATITTTHTAQQQAAPEPRNNTKPKQESSFEFKSPQAPPPPA
PTTQPPAQDAGFYSVDLERDNKGFGFSLRGGCEYNMDLYVLRLAEDGAAVRNGKMKVGDE
ILEINSESTKGMKHARAIELIKNGGRRARLVLKRGDGSVPEYDPSIDGAGPVAGVQNASE
VSTLPHNNAPSDTNAPVPHKPSRSTDKKGHHHSKHRSPEKKGKRKGGASGETGASKQSKK
KGNKSQRSGGDSHGTHHRGHRSPDKGRSRARSADNTLDSRHSQGHHNTHRSPYRSTHRNR
SPYGHRSPYGHRSPFHSPHRSHHNSPTRYRRTQSSDPYRQPSPDRQRRRGPERPNGEVAP
VLRKPPGPVPRPFLDESILQEPPALDRINREATQLREPREEHLFGEDSLLLRASNLERDY
RGDSLLSAAASGQRGETLPRVHTPESDSAYKRYSSLLRGRSPARVEREPRYAPREESPDP
HHRAPSLGRDISPVRSFREPEEEEEEAAAPRLKEYYSKSNASRASKALPEPKRKAYKDST
KDLSI
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagtgatccaaaagaagaatcactggaccactaaagttaacgagtgcgcggtt
ctcaaagacgctcgcggtgacttaaatgtgcaattgctcggtggcgcggagaacggagag
ttcgcatacatcggacaaattaacgatgatatcgtggtttacaaaaatggaaaattaaca
gagggggagttgatattggaagtagagaacctctcgatctctgggttgcccctgtatgat
gtacagacagtgataaagaattgcatgggtcctatcagattgaaaacggtcagacaagga
aacaagctgaataaggacctgaagcactatctgagccagcgcttccagaagtcctctccg
gaccacgagctgcaacagaccatcagagacaacctctaccgccacgccgtgccttgtaca
acccgcctgccgcgtgacagagaggtccctggagtagattacaacttcctgccggtggag
gacttcctggcgctggagaagtgtggaacccttctggaaataggaacatatgaaggtaac
tattatggaacacccaagccgccaaaccagccccctagtgggaaagtgattactagtgat
gctttgcaagacagcctcccgggctcccagcactccactccccgacgcaccaagtcctac
aatgagatgcaaaatgctggaatagtgcctgtagacctggaggaggacgaggaactcccg
gagatgaacagtagcataacaggagactcaagtgaacccgacgagcgcccctctgtgcgc
ccctacgccctacgtgagaacgccccgtcctatggtgtgatcaacgcgtcgtcatccacc
acggacggctctcagcagacacacacacacctcagccatcctcctacagaagaggacccc
ctgggacctctagctgacaactgggagatggcctacaccgagaacggagaggtctacttt
atagaccacaacacaaagaccacatcctggatcgatccccggtgcctgaacaaacctccc
aaacccctagaagaatgtgaagacgatgaaggggtacacacagaagagatggacagtgag
ctagagctgccaacaggttgggagaaaatagaggatccagtctatggggtttactatgtg
gatcacatcaacaggaagacccagtatgagaaccctatactggaggctaagcggcggaag
cagctcgagcaacagcagccaccagaaggtgagcgctacatccgagaatggatagaggat
gccaccctggctggtgcccccctggccagctataccgccaaccaccaggagacctacagg
gacacccaggccggacccccactgccacccctcatcgggcccaaacgagggaagccgttc
ttcacgaggaacccggcggagctgaagggaacctttatcaacaccaaactaaggaagagc
caccgagggtttggcttcaccgttgtcgggggcgacgagcctgatgagttcctacagatt
aagagtctggttctggacggacctgctgccgtcgacggcaagatggagacaggtgacgtg
atcgtgagtgtcaatgacacatgcgtgctgggctacacccacgcccaggtggtgaaggtc
ttccagtccatccaaatcggctccatggtcaacctggagctgtgccgtggctaccccctg
ccctttgaccctgacgaccccaacactagcctggtgacctccgtggccatcgtggacaag
gagcctatcatcattaacggccaggagagctacgactccccatccagccacggcagccag
accggaggccccgttaacgggttgagagagtcaggaccccacagcccctcctccgccgag
gtggcatccaacggctcgcacggttaccccagcgactcggtgacgctggcgtcgtccata
gcaacgcagccagagctgatcacagtgcacatggagaagggagacaaaggctttgggttc
accatcgcagacagccctgcagggggaggacagagggtcaaacagatcgtagactacccc
cgctgcaggggcctgaaggagggggacattattgtggaggtgaacaagaggaacgtccag
agcatgagccacaaccaggtggtggacctgctcagcaagtgccccaaaggaagtgaggtc
accatgctggtgcagagaggtggaggggtggctcctgcaaagaaaagcccaaagctgcag
ttagcgaggaaggacagtcagaacagttctgtgcacagtgtgtccagccaccggagtacc
cacactgactcccctgtgcacctgtccctggccacccctttctgcgagagcgccgccccc
ccaccccccacccagcccctgcccggcctgcctccccaggaacctcaggcagacgggacc
atccagaggaaaccggatcccttcaaggtctgggcccagtccaggagcatgtatgaaagt
aggctgcctgatttccaggagcaggacatcttcctgtggagaaaggacacgggctacggg
ttccggatcctgggagggaacgagccaggagagccgatctacatagggcacatagtgaag
tacggggcagcggatgaggacgggcgcctgcgttcgggggatgagctcatctgtgtggac
ggcacggcagtggtggggaagtctcatcagctggtggtacagctgatgcagcaggccgcc
aagcagggccacgtcaacctcaccgtgcgacgcaagactggctacggagggtctaaaggg
gagggtgaggtgcccccgtccccagcctcgtcccaccacagcagcacacaggccccctcc
ctcacagaggagaagcggactccccagggcagccagaactccctcaacactgtcagctcc
agcagtggctccaccagcggcatcggcagcgggggtggtgggggctcgggtagcaccgtg
gtcaacaacgccctgcagccctacgatgtggagatccgccgcggggagaacgagggcttc
ggatttgtgattgtctcgtctgtgtcccgacccgagtctggcaccaccttcgctggaaat
gcatgtgtggccatgccccacaaaataggtcgtattattgaggggagccctgcggaccgc
tgtgggaagctgaaggtgggggaccgtatcctggccgtcaacggctgctccatcaccaac
aagtcacactcggacatcgtcaacctgatcaaggaggccgggaacaccgtcacgctaagg
atcattcccggagacgagtcctctaatgcatcactgctgaccaacgctgagaagatcgcc
actataacaaccactcacacagcccaacaacaggctgcacctgagcccagaaacaacacc
aaaccaaaacaggagtcctcttttgagttcaaatccccccaggcccctcctccccctgcc
ccaacaacacaacctccagcccaggatgctgggttctactcagtggacctggagagggac
aacaaaggttttgggttcagcctgcgaggaggttgtgagtacaacatggacctgtatgtg
ctgagactagctgaggatggagcggctgtacgcaatggcaagatgaaggtgggagatgag
atcctggagataaacagtgagagcaccaagggcatgaagcacgcccgcgccatcgaactg
attaaaaacggcggccgccgcgcccgcctagtcctcaagcggggcgacggctcggtgcct
gaatatgaccccagcatcgacggtgccggtccagtcgcaggggtacaaaacgcttcggaa
gtgagcaccctgccccacaacaacgcaccatcggacaccaacgcaccagtccctcacaaa
ccatctcggagcacggacaagaagggccaccaccattccaaacaccgctccccggaaaag
aagggcaagcgcaagggaggggcgtctggggagacgggggcctccaagcagtccaagaaa
aagggcaacaagagccagaggtctggcggggatagccacggcactcaccaccgaggacac
cgctccccggataagggccgtagccgggcccgcagtgcagacaacaccctagacagtaga
cacagccaagggcaccacaacacccaccgctctccgtacaggtccactcaccgcaatcgg
tcaccctatggccaccgttccccctatggccaccggtcacccttccactccccccaccgc
tcacaccacaactcccccacccgctaccgccgtacccagtcctcagacccctaccggcag
ccctccccagatagacagaggcgccgtgggccagagaggcccaacggggaggtggcacca
gtgctaaggaagcctcctggccctgtgcccagacccttcctggatgagagcatcctacag
gagcccccagccctggaccgaatcaacagggaggccacgcaactgagggagcccagagag
gagcacctgtttggggaggacagccttctgctgagggcctccaacttggagcgtgactac
agaggagacagcctgttatctgctgctgccagtggccagagaggggagacccttcccagg
gtccacacccctgagtcagacagcgcctacaagaggtacagttcactgctgaggggtcgc
tcgcctgcgagggtggagagagagccgcgctacgcccccagggaggagtccccagacccc
caccacagagcccctagcctgggccgagacatttcacctgtcaggagcttcagagagcca
gaggaggaggaggaggaagcagcagcacccaggctgaaggagtattacagcaagtccaat
gccagccgtgcttccaaagcgctcccagagcccaagcggaaggcctacaaagatagcacc
aaagacctgagcatctga
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integrated database retrieval system
