Coregonus clupeaformis (lake whitefish): 121575844
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Entry
121575844 CDS
T08357
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121575844
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u5
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Serglycin
Motif
Other DBs
NCBI-GeneID:
121575844
NCBI-ProteinID:
XP_045078867
LinkDB
All DBs
Position
10:complement(27605011..27801266)
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AA seq
1656 aa
AA seq
DB search
MAKVIQKRNHWTTKVNECAVLKDAQSDLNVPLLGGAENGEFAYIGQVNEDIVIYKKGKLT
EGELILEVENLSISGLPLYDVQTVINNCKGPIRLKTVRQGTKLNKDLKHYLSQRFQKSSP
DHELQQTIRDNLYRHAVPCTTRPPRDGEVPGIDYNFLPVEDFLALEQSGTLLEIGAYEGN
YYGTPKPPRQPPSGKVITSDALQDSLPGSQHSTPRRTKSYNDMQNAGIVPVDLEEDEELP
EMNSSLTDNKYFSRNTRLVNTGDSSEPDEHPYAPRENAPSYGVNNTLSSTTEGSQQTHTH
LSHPPTEEDPLGPLTDNWEMAYTENGELYFIDHNTKTTSWIDPRCLDKPPKPLEECEDDE
GVHTEELDSELELPTGWEKIDDPVYGVYYVDHINRKTQYENPILEAKRLKQLEQQQPPEG
ERYIREWIEDATLAGAPLASYTANHQETYRDPQAGPPLPPLIGPKRGKPFFTRNPAELKG
TFINTKLRKSHRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVL
GYTHAQVVKVFQSIHIGSMVNLELCRGYPLPFDPDDPNTSMVTSVAIVDKEPIIINGQDS
YDSPSSHGSHTGGPVNGMRESRPHSPSSAEVASNGSHGYLSDSVTLASSIATQPELITVH
MEKGDKGFGFTIADSPAGGGQRVKQIVDYPRCRGLKEGDIIVEVNKRNVQSMSHNQVVDL
LSKCPKGSEVSMLVQRGGGVAPAKKSPRLQLVRKDSQNSSVSSHRSTHTDSPVHTSLAPP
LSESTAPPPPSQPLPGLPPQDPQADGTIHRKPDPFKIWAQSRSMYESRVPDFQEQDIFLW
RKDTGYGFRILGGNEPGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAVMGKSHQLVV
QLMQQAAKQGHVNLTVRRKTGYGVSKGEGEVPPSPASSHHSSTQAPSLTEGKRTPQGSQN
SLNTVSSGSGSGSGSTSGIGSGGGGGSGSAVVNTALQPYDVEIHRGENEGFGFVIVSSVS
RPESGTTFAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNL
IKEAGNTVTLRIIPGDESSNASLLTNAEKIATITTTHTPQQQAAPEPRNNTKPKQESSFE
FKSPQAPPPPAPTTQPTAQDAAFYSVDLERDNKGFGFSLRGGHEYNMDLYVLRLAEDGAA
VRNGKMRVGDEILEINGESTKGMKHARAIELIKNGGRHARLVLKRGDGSVPEYDPSIDGV
GPSTGIQNASEVSTLPHNNTPSVTNTPDPHKPSQSKDKKGHHHSKHRHRSPDRKSKSKGG
ASGETGASSKQSKRKGDKSKRSGGDSHGTHHHRRHRSPDKGRSRARSAEKTLDSRHSQGH
RGREGRSPDRHHTHRHRSPYRSPQRNRSPYGHRSPYGHRSPYRSPHRSRQPSPTRYHRTQ
SSDPYRQPSPDRLRGREPERPNREVAPVLRKPPGPMPSPYLEESVLREPPALDRLNREAT
LLRELREERLFGEDSLLLRASTLERDYRGDSLLSAAVRGQRGETMPRVHTPESDSAYKRY
SSLLRGRSPERVEREASYAPRQESPDPRYRVRSLGRDISAVRSFREPEEEEEEEGATAPK
LKESYSTLKSDASRASKALPEPKRKAYKDSPKDLSI
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtgatccaaaagaggaatcactggaccaccaaagttaacgagtgcgcggtc
ctcaaagacgctcagagtgacttgaatgtgccattacttggtggtgcagagaacggagag
ttcgcctacatcggacaagttaacgaggatatcgttatttacaaaaaaggaaaattaaca
gagggggagttgatattggaagtagagaacctatcgatctctggattgcctctgtatgat
gtacagacagtgataaataattgcaagggtcccatcagattgaaaacagtcagacaagga
accaagctgaataaggacctgaagcactatctgagccagcgcttccagaagtcctccccg
gaccacgagctgcagcagaccattcgagacaacctctaccgccatgccgtgccttgtaca
acccgccccccacgtgacggagaggtccctggaatagattataacttcctgcctgtggag
gactttctggcgctggagcagagtgggacccttctggaaataggagcatatgaaggtaac
tattatggaacacccaagccgccgaggcagccccctagtgggaaagtgattaccagtgat
gctttgcaagacagcctcccgggctcccagcactccactccccgacgcaccaagtcctac
aatgatatgcaaaatgctggaatagtgcctgtagacctggaggaggacgaggaactccca
gagatgaacagtagcttaacagataataaatatttttctagaaatactagactcgtgaac
acaggagactcgagtgaacccgacgagcacccctacgccccgcgtgagaacgccccgtcc
tacggtgtgaacaacacattgtcatccaccacggagggctctcagcagacacacacacac
ctcagccatcctcccacagaagaggaccccctgggacctctaacagacaactgggagatg
gcctacaccgagaacggagagctctactttatagaccacaacacaaaaactacttcctgg
atcgacccacgctgcctggacaaacctcccaaacctctggaagaatgtgaagacgatgaa
ggggtacacacagaagagctggacagtgagctagagctgccaacaggctgggagaaaata
gatgatccagtctacggggtttactatgtggatcacatcaacaggaagacccagtatgag
aaccctatactggaggctaagcggctgaagcagctcgagcaacagcagccaccagaaggt
gagcgctacatccgagaatggatagaggacgccaccctggctggtgcccccctggccagc
tataccgctaaccaccaggagacctacagggacccccaggccggacccccactgccgccc
ctcatcggtcccaaacgagggaagcccttcttcacgaggaacccagcggagctaaaggga
accttcatcaacactaaactgaggaagagccaccgggggttcggcttcaccgtagtcggg
ggcgacgagcctgatgagttccttcagatcaagagtctggttctggacgggcctgctgcc
ctcgatggcaagatggagacaggtgacgtgatcgtgagtgtcaatgacacatgcgtgcta
ggctacacccacgcccaggtggtgaaggtcttccagtccatccatattggctccatggtc
aacctggagctgtgccgcggctaccccctgccttttgaccccgacgaccccaacaccagc
atggtgacctccgtggccatcgtggacaaggagccgatcatcatcaatggccaggatagc
tacgactccccgtccagccacggcagccatactggaggccctgttaatggcatgagggag
tcgagaccacacagtccctcctccgcagaggtggcgtccaatggctcgcacggttacctc
agcgactctgtgacgctggcgtcgtccatagcgacgcagccggagctgatcacagtgcac
atggagaagggagacaaaggctttgggttcaccatcgcagacagccctgcagggggagga
cagagggtcaaacagatagtggactacccccgctgcaggggcctgaaggagggggacatt
atcgtggaggtgaacaagaggaacgtccagagcatgagccacaaccaagtggtggacctg
ctcagcaagtgccccaaaggaagtgaggtcagcatgctggtgcagagaggtggaggggtg
gcacctgcaaagaagagcccaaggctgcagttagtgaggaaggacagtcagaacagttct
gtgtccagccaccggagtacccacactgactcccctgtgcacacgtccctggccccccct
ctcagcgagagtaccgcccctccacccccctcccagcctctgcccggcctgcctccccag
gacccccaggcagacgggaccattcacaggaaaccggaccccttcaagatctgggcccag
tccaggagcatgtatgaaagtagggtgcctgactttcaggagcaggacatcttcctgtgg
agaaaggacacaggctacgggttcaggatcctgggagggaacgagccaggagaaccgatc
tacatagggcacatagtgaagtatggggcagcggacgaagatgggcgcctgcgttcgggg
gatgagctcatctgtgtggacggcacggcagtgatgggcaaatctcaccagctggtggta
cagctgatgcagcaggccgccaagcagggccacgtcaacctcaccgtgcgacgcaagacc
ggctacggagtgtctaaaggggagggcgaggtgcccccgtccccagcctcgtcccaccac
agcagcacccaggccccctccctgactgaggggaagcggaccccccagggtagccagaac
tccctcaacacggtcagctctggcagcggctccggcagcggctccaccagtggcatcggc
agcgggggcggcgggggctcagggagtgctgtggtcaacacggccctgcagccctacgac
gtggagatccaccgcggggagaacgagggctttggattcgtcatcgtctcctccgtgtcc
cgacccgagtctggcaccaccttcgctggaaatgcatgtgtggccatgccccacaaaata
gggcgtattatcgaggggagccctgcagaccgctgtgggaagctgaaggtgggagaccgt
atcctggccgtcaacggctgctctatcaccaacaagtcccactcagacatcgtcaacctg
atcaaggaggccgggaacactgtcacgctaaggatcattcccggagacgagtcctctaat
gcatcactgctgaccaacgctgagaagatcgccactataacaaccactcacacgccccag
caacaggctgcacctgagcccagaaacaacaccaaaccaaaacaggagtcctcttttgag
ttcaaatccccccaggcccctcctccccccgccccaacaacacaacctacagcccaggac
gctgcattctactcagtggacttggagagggacaacaaaggttttgggttcagcctgcga
ggaggtcatgagtacaacatggacctttacgtgctgaggctagccgaggacggagcggcc
gtacgcaacggcaagatgagggtgggagatgagatcctggagatcaacggcgagagcacc
aagggcatgaagcacgcccgcgccattgaactgataaaaaatggtggccgccacgcccgc
ctggtcctcaagaggggtgacggctcggtgcctgaatatgaccccagcatcgacggtgtc
ggcccatccacagggatacaaaacgcttcggaagtgagcaccctgccccacaacaacaca
ccatcggtcaccaacacaccagaccctcacaaaccatcacagagcaaggacaagaagggc
caccaccattccaaacacagacaccgctccccagacaggaagagcaagagcaagggaggg
gcgtctggggagacaggggcctcctccaagcagtccaagaggaagggcgacaagagcaag
aggtctggcggggatagccacggcactcaccaccaccggagacaccgctctccggataag
ggccggagccgggcccgcagcgcagagaaaaccctggacagtagacacagccaaggacac
agagggagggaaggccgctcccctgacaggcaccacacccaccgccaccgctctccctac
aggtcccctcaacgcaatcggtcaccctatggccaccgctccccctatggtcaccggtca
ccctaccgctccccccaccgctcacgccaaccctcccccacccgctaccaccgcacccag
tcatctgacccctacaggcagccctccccagatagactgaggggccgggagccagagagg
cccaaccgggaggtggcaccagtgctgaggaagcctcctggccctatgcccagcccctat
ctggaggagagcgtgctgcgggagcctccagccttggaccggctcaacagggaggccacg
ctgctgagggagctcagggaggagcgcctatttggggaggacagccttctgctgagggcc
tctaccctggagcgtgactacagaggagatagcctgttatctgctgctgtccgtggccag
agaggagagaccatgcctagggtccacacccccgagtcagacagcgcctacaagaggtac
agctcactgctgaggggccgctcgcctgagagggtagagagagaggcaagctacgccccc
agacaggagtccccagacccccgctacagagtccggagtctgggccgagacatctcagct
gttaggagcttcagagagccggaggaggaggaggaggaggagggagcaacagcacccaag
ctgaaggagtcttacagcacactcaagtctgacgccagccgtgcttccaaagcgctcccg
gagcccaagcggaaggcctacaaagacagccccaaagacctgagcatctga
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integrated database retrieval system
