KEGG   Coregonus clupeaformis (lake whitefish): 121575861
Entry
121575861         CDS       T08357                                 
Name
(RefSeq) protein snail homolog Sna
  KO
K05707  snail 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    121575861
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cclu03000]
    121575861
Transcription factors [BR:cclu03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    121575861
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-H2C2_2 zf-C2H2_jaz zf-met C2CH-3rd_BIRD-IDD zf-C2H2_6 zf-C2HE zf-Di19 zf-C2H2_7th_ZNF462 zf-C2H2_15 Zf-C2H2_ZNF451_C Zf-C2H2_ZNF451_6th zf-BED Zn_ribbon_8 zf-C2H2_ZNF462_1st Zn_ribbon_IS1595 MRI Zn_ribbon_Dof
Other DBs
NCBI-GeneID: 121575861
NCBI-ProteinID: XP_041745086
LinkDB
Position
10:complement(31220360..31224521)
AA seq 258 aa
MPRSFLVKKYFANKKPNYSELECQNATSLERYPLAELPAGDNNSATTCYTTGLVWDVSFL
PALYVPTSPTDASPTPGPLDLSSPSSLSSSASSSGEEDEGRTSDPPSPEPTDTYHPPQRP
KRTSTKSHGAPNEDERVAPVTAARPAFFCKHCPKEYTSLGALKMHIRSHTLPCVCPTCGK
AFSRPWLLRGHIRTHTGERPFSCQHCNRAFADRSNLRAHLQTHAEVKKYQCGVCSRTFSR
MSLLQKHSAASCCSSSTA
NT seq 777 nt   +upstreamnt  +downstreamnt
atgcctcggtctttcttggtcaaaaagtatttcgccaacaaaaaacccaactacagtgaa
ctggagtgtcaaaatgccacctcactggagaggtacccactagctgagcttccagcaggg
gacaacaactcagctaccacctgttacacaacgggactggtatgggacgtgagctttctt
ccagccctctacgtccccacatcccccactgatgcctcccccacccctgggcccctggac
ctaagctccccctccagcctcagcagcagtgccagtagcagtggggaggaggacgagggg
cgcacctctgacccccccagccccgaacccacagacacctaccacccccctcagcgcccc
aaacgcaccagcaccaagagtcatggggccccgaatgaggacgagagagtggccccagtc
actgcagcaaggccagccttcttctgcaagcactgccctaaagagtacaccagcctgggg
gctctgaagatgcacatccgctcacacacgctaccctgtgtctgccccacctgcgggaaa
gccttctccaggccctggctgctgcgcggccacattcgcacacacactggtgaacgccca
ttctcctgccaacactgtaaccgtgcctttgctgaccgctccaacctgcgggcgcacctg
cagacccacgctgaggtgaagaagtaccagtgtggtgtgtgttcccgtaccttcagccgc
atgtccctcctccagaaacacagtgcagccagctgctgctcctcctccacagcgtga

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