Coregonus clupeaformis (lake whitefish): 121575861
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Entry
121575861 CDS
T08357
Name
(RefSeq) protein snail homolog Sna
KO
K05707
snail 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121575861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121575861
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
121575861
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2HE
zf-Di19
zf-C2H2_7th_ZNF462
zf-C2H2_15
Zf-C2H2_ZNF451_C
Zf-C2H2_ZNF451_6th
zf-BED
Zn_ribbon_8
zf-C2H2_ZNF462_1st
Zn_ribbon_IS1595
MRI
Zn_ribbon_Dof
Motif
Other DBs
NCBI-GeneID:
121575861
NCBI-ProteinID:
XP_041745086
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Position
10:complement(31220360..31224521)
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AA seq
258 aa
AA seq
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MPRSFLVKKYFANKKPNYSELECQNATSLERYPLAELPAGDNNSATTCYTTGLVWDVSFL
PALYVPTSPTDASPTPGPLDLSSPSSLSSSASSSGEEDEGRTSDPPSPEPTDTYHPPQRP
KRTSTKSHGAPNEDERVAPVTAARPAFFCKHCPKEYTSLGALKMHIRSHTLPCVCPTCGK
AFSRPWLLRGHIRTHTGERPFSCQHCNRAFADRSNLRAHLQTHAEVKKYQCGVCSRTFSR
MSLLQKHSAASCCSSSTA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtctttcttggtcaaaaagtatttcgccaacaaaaaacccaactacagtgaa
ctggagtgtcaaaatgccacctcactggagaggtacccactagctgagcttccagcaggg
gacaacaactcagctaccacctgttacacaacgggactggtatgggacgtgagctttctt
ccagccctctacgtccccacatcccccactgatgcctcccccacccctgggcccctggac
ctaagctccccctccagcctcagcagcagtgccagtagcagtggggaggaggacgagggg
cgcacctctgacccccccagccccgaacccacagacacctaccacccccctcagcgcccc
aaacgcaccagcaccaagagtcatggggccccgaatgaggacgagagagtggccccagtc
actgcagcaaggccagccttcttctgcaagcactgccctaaagagtacaccagcctgggg
gctctgaagatgcacatccgctcacacacgctaccctgtgtctgccccacctgcgggaaa
gccttctccaggccctggctgctgcgcggccacattcgcacacacactggtgaacgccca
ttctcctgccaacactgtaaccgtgcctttgctgaccgctccaacctgcgggcgcacctg
cagacccacgctgaggtgaagaagtaccagtgtggtgtgtgttcccgtaccttcagccgc
atgtccctcctccagaaacacagtgcagccagctgctgctcctcctccacagcgtga
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