Coregonus clupeaformis (lake whitefish): 121575933
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Entry
121575933 CDS
T08357
Name
(RefSeq) neurogenic differentiation factor 4-like
KO
K09079
neurogenic differentiation factor 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121575933
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Tal/Twist/Atonal/Hen, Atonal
121575933
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GFIT
Motif
Pfam:
Neuro_bHLH
HLH
Nop53
CCDC106
RNA_polI_A34
Motif
Other DBs
NCBI-GeneID:
121575933
NCBI-ProteinID:
XP_041745159
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Position
10:complement(18599163..18604960)
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AA seq
330 aa
AA seq
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MMANSYGRPSEGAELVSSLEWMDDDVSSPDRDKPIKAHRYRPGGMGHLGRELGSEDVEED
EEEEEEEGQGDGNAPKRRGPKRKRMTKARQERFKARRVKANARERSRMHGLNDALENLRS
IMPCHSKTQKLSKIETLRLARNYICALSEALEGDQSTESRAFMETLCEGLSQPTSNLVAG
CLQLGTGGFVEERPEDRHGGRGGPTVLGGVGMTVRPISYSSPGLPSPPYGTLDSAHLLHL
RGMKGGAYESHSPNDCNTPPYDCPPTPPLSIGSNLVPKQSSPHYLLPHHYPPSSMGLYQS
ARYELPLEMPYDLYHPPHMAPPQMGTVYGD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgatggccaattcgtacggaaggcccagcgagggggcagagctagtcagctctctggaa
tggatggatgatgacgtgagctccccagacagagacaagccaatcaaagcgcaccgctac
agaccaggtggaatgggccacctgggcagggagctgggcagcgaggatgtggaggaggat
gaggaggaggaggaagaggagggccaaggggatgggaacgctcccaaacgcagagggccc
aagaggaaaaggatgaccaaggcccggcaggagcgcttcaaggcgcgacgtgtgaaggct
aacgcccgggagcgctcgaggatgcacgggctgaacgacgcgctggagaacctgcgcagc
atcatgccctgccactccaagactcagaaactgtccaagattgagaccctgcggctggcc
cgcaactacatctgtgccctgtctgaagccctggagggggaccagtccacggagagcagg
gccttcatggagaccctgtgtgaaggcctctcccagcccaccagcaacctggtggctggc
tgtctgcagctcgggactgggggttttgttgaggagaggcctgaggacaggcatgggggg
agaggagggcccacagtcctgggaggggtggggatgaccgttagaccaatcagctactcc
tcccccggcctgcccagcccgccctatggcacattggactctgcccacctgctccacctg
aggggaatgaagggaggggcttatgagagccactcccctaatgactgtaacacccctccc
tacgactgcccccccacaccccctctcagcatcggcagtaacctggtgcccaagcagtcc
tcgccccactacctccttcctcaccactaccccccctcctccatgggcctgtaccagagc
gcccgctacgagctgcccctggagatgccctatgacttgtaccaccctcctcacatggca
cccccacagatgggcaccgtctatggggattaa
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