Coregonus clupeaformis (lake whitefish): 121575955
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Entry
121575955 CDS
T08357
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121575955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121575955
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121575955
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
121575955
NCBI-ProteinID:
XP_041745181
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Position
10:complement(22597977..22599011)
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AA seq
162 aa
AA seq
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MAPVNICNMVMTTKDKIKFRKPVVEKMRRDRINSSIEQLKTLLKTELQAHQPNSKLEKAD
ILETAVFYLKDNSMRPAASFNAASPVQSYAEGFTRCLEETLRFLSANNQPAGSQQKLLNH
FHRAQKLGDRVVLSPNRVTVPHNSSTPKRVTAGGRGPLWRPW
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtcaatatttgcaacatggtgatgacaacgaaagataaaatcaaatttaga
aaaccagtggtggaaaagatgcgccgagaccgcattaacagcagcatcgaacagctcaag
acactcctcaaaaccgaacttcaagcacaccaacccaactcgaaactggaaaaggctgac
attctcgagacagctgtgttttacctgaaagacaacagcatgcgccctgctgcttcattc
aacgcagcgtcacctgtccagagctacgcggagggattcacccgctgcctggaggagacg
ctgcgcttcctctcagcgaacaaccagccggctggctcacaacagaagcttctcaatcac
ttccatcgggctcagaaacttggtgacagagtcgtgctgagtccaaaccgcgtgacggtc
cctcacaacagcagcactccgaaacgtgtcaccgcaggtggaagagggcctctgtggaga
ccatggtga
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