Coregonus clupeaformis (lake whitefish): 121575983
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Entry
121575983 CDS
T08357
Name
(RefSeq) prolargin-like
KO
K08125
prolargin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cclu00535
]
121575983
Proteoglycans [BR:
cclu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
121575983
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRRNT
LRR_9
DEC-1_N
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
121575983
NCBI-ProteinID:
XP_041745218
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Position
10:46233314..46239986
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AA seq
380 aa
AA seq
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MKTGVGIYTALVLCLLMGAVFCQRPRPKKPAKPPKPTKRPYFKPAPQPEEPEPQEPTDFP
PPILGPPSMFPDCPRECFCPPSFPNALYCENRNLRTVPVIPSRVHYLYLQNNYISEVTAE
PFNNATELRWVNMANNRIKKVDKQTFEKVPGLLFLYMERNQLKEVPNDLPAGLEQLRLSH
NQISKIPSGAFGKMEHLSLLDLHHNKLSDSDMGKNTFKDLKNLVQLNLAHNILKKMPANI
PNGITQLFLDRNNIDDIPKDYFQGFSKLAFVRLNYNQLSDKGIPKAVFNVSTLLDLHLAH
NQLTSVPLFNSQLVHLHLNHNSIESINGTQLCPFSLSSESLTDEALIPRLRYLRLDGNHL
SPPVPLDVIMCFRHLTSIVV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaggtgtgggaatctacactgccctggtgctctgtctcctgatgggggcagtg
ttttgccagagaccaaggcctaagaaacctgctaagcctccaaagcccaccaagcgcccc
tacttcaagcctgccccacaacctgaggaaccagaaccccaggagcccacagacttcccc
cctcccatccttggccccccttccatgttccctgactgtccccgggagtgtttctgccca
ccctccttccccaatgccctctattgtgagaaccggaacctacgtacggtccctgtgatc
ccctcgagagtacactacctgtacctgcagaacaactacatctccgaggtaacggcggaa
cccttcaacaatgccacagagctgagatgggtcaacatggccaacaaccgcatcaaaaaa
gtggacaagcagacgtttgagaaggtacctggtctgttgtttctctacatggagaggaac
cagttgaaggaggttcctaatgacctgccagctgggttggagcagctcagactcagccac
aaccagatctccaagatcccctctggagccttcggcaagatggagcacctctctctgctc
gacctgcaccacaacaagctgagtgacagtgacatggggaagaacacgtttaaagacctg
aagaacctggttcagctgaacttggcccataacatcctgaagaagatgccagctaacatc
cccaatggcatcacacagctattcctggacaggaacaacattgacgacatccctaaggac
tacttccaaggcttctccaaactggcgtttgtgaggctcaactacaaccagctgagtgat
aagggaatccctaaggctgtgttcaatgtatccactctgctagaccttcacctggcccac
aaccagctcacctctgtccccctgttcaactcccagctggtgcacttgcacctcaaccac
aacagcatcgagagtattaacgggacccagctgtgtccattcagtctgtcctctgagagt
ctgactgatgaggctctgattcccagactcaggtacctgcgtctggatgggaaccacctg
agtcctcctgtccctctggacgtcatcatgtgtttcagacacctcacgtccatcgttgtc
tag
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