Coregonus clupeaformis (lake whitefish): 121576368
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Entry
121576368 CDS
T08357
Name
(RefSeq) nuclear factor of activated T-cells 5
KO
K17335
nuclear factor of activated T-cells 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121576368
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
121576368
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
121576368
NCBI-ProteinID:
XP_041745387
LinkDB
All DBs
Position
11:8483311..8527682
Genome browser
AA seq
1517 aa
AA seq
DB search
MPSDFISLLSADLDLNSPKSLYSKESVYNLLPKELQLQPSSSSQTDAPTMSQKSGGEAGP
PPSAAMASDATSSSPSPSSSLAMDQHKPPLLLQHHPSGAPREVSGAPEGSEMQGMEGALS
APEGGDGSETSSGTGGGDPGAPGAVGVGAQQQQPQNTPSKRRPVLSISPPPEDLFDDSSM
SCQEDPAPAGPAGPDSEHSSSIWADDSASNFSLISSSSYNDNTEVPRKSRKRTPRQRPGP
RPAPPEDSMDVFDADSAKAPHFVLSQLGPDKASPKPSSLEAGCMLKGGLLSGQYPQKSEG
KELKILVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGVSEPVVLQVFVASDAGRVK
PHGFYQACRVTGRNTTACKEVDIEGTTVIEVPLEPSSTMSLAVDCVGILKLRNADVEARI
GVAGSKKKSTRARLAFRVNIPQPDGSVLTLQTTSSPILCTQPAGVPEILKKSLHSCSVRG
GEELFIIGKNFLKGTKVIFQENPADDNSWQAGAEIDMELFHQNHVVVKVPPYHSLSVSSP
VSVGVYIMTNAGRSHDIQPFTYTPDSENSLNMSVKTEGSSLVKACTFHDQINSLVSDPAQ
SAGELVKRQEVTPMEVSSNTPSKALFKQPSDTLILVQQTLDLSSSAPPSNESFPSPMPLQ
PGDVDLPQAPVFPSLEPLGTIQKQDIAPITSFPVSSDTTTLPPVPPEVPQQFLRDPQESL
PQEASSSSSGVMVVGMSQMAPPSQAPQLERAVRELQAGGSSLVQQVLEAAVAQQQLNSVL
YSPTPSTDTLQQNVQDTMNSLRLGCTEGSLATQQHLQIQQQQQQQIQQQLQQQQILGNMQ
QQQQQIQQQQQIQQQQQQQLHQQQHQVLGNIQLQPQLLLQPQDQQLQQQQQILGNLQQQQ
LQHQQFQQQQQQVLGNIQLQDQQQLLGNLQQQNQAVGNMQQLQQQQQQQQQLQQQQQQQQ
QLQQQQQQQQQLQQQQQQQQQLQQQQVLENFQQQLQAELLQPQIHCSSQPQQQQPVSLLQ
QAGELLTIQTSSFPQQPPSHTSPPQQLLQSPRPLSETPSPQHQVQAALLQNTLTVLTSGS
LDHEQQVTGSTLFLSPNTLSNQGSQQQLAFLSSMETSASEPQTVSVFQPQTQQQQQSTPM
DQQQSPQQTQPQQTQQQLPMAQQGSLFQTSTLSPSQHPQPQPADLLLCTASLNPQALPPA
LLFSTQAQSPSMGSSSTPHPQDTPAPLLFSQPTMVGIRVGVAQSDPAEPMSFQDQSSTVG
GTPASINPSQQGLFQGQQPMQVGSSSGSGPASQQVELFLPQGSLSGLQSSMATQELENQA
AAAATIFVMQSGLGVVGLQSTTSSPGQRPPEQLFQTGVSGNVSQPGGQPNLFVFGLQNDS
SQLMTSSGPTLSAQGQPQNPNPVQASHIQSLLDPNISQTATPMQTNLQTPMQSSLQNTMS
SLENAMQTNLQTPMQTNTHTAMQTNIQTAIETSLPTLMQTNVQTSLQNAIQTNMQTSMST
SQNMEKMEDLLESLQKQ
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgattttatatccctactcagcgcggatctcgaccttaattcccccaaatct
ctttactctaaagagtctgtgtataacctcctccctaaggagctccagctgcagccatcc
tcctcctcccagacagacgcacccaccatgagccagaagagtgggggagaggccggaccg
cccccttctgcagccatggcctcagatgccacctcatctagcccttctccatcctcctct
ttggccatggaccagcacaagcctcctctcctcctccaacaccatcccagcggtgccccc
agagaggtgtccggagccccagaaggatcagagatgcaaggcatggagggagctctgtct
gcccctgaaggtggagacggcagtgagaccagctctggaacaggaggaggagacccagga
gcaccaggggcagtgggggtgggagcccagcagcagcagccccagaacaccccctctaag
cggaggccagtgttgagcatctccccccctccagaggacctgtttgatgacagcagtatg
tcctgccaggaggatccagccccggccgggccagcaggcccagactcagaacatagcagc
agcatctgggctgacgactcggcctccaacttcagcctgatcagctccagctcctacaac
gacaacacagaggtcccccgcaagtcccgtaaacgcaccccccgccagcggcccgggccc
aggcctgcacccccagaggacagcatggatgtgtttgatgcagacagcgccaaggcccca
cactttgtcctgtctcagctgggcccagacaaggccagccccaagcccagttctctggag
gctgggtgcatgctgaagggaggcctgctgtcaggtcagtatccccagaagagtgagggc
aaggagctgaagatcctggtgcagccagagacccagcaccgggcacgctacctaaccgag
ggcagccgcggctctgtcaaagaccgcacacaacagggcttccccacggtcaagttagag
ggcgtcagtgagccggtggtgctgcaggtgtttgttgccagtgacgcaggcagagtgaag
cctcatgggttctaccaggcatgcagggtgacaggacgcaacaccacagcctgcaaggag
gtggacatcgagggaaccaccgtcatagaggtccctctggagcccagcagcaccatgtca
cttgcggttgattgtgtggggatcctgaagctgcgtaacgcggacgtggaggctcgtatc
ggtgtggccgggtccaagaagaagagcacccgggccaggctggcattcagggtcaacatc
ccccagcctgacgggtctgtcctcaccctgcagaccacctcgtcacccatcctctgcacc
cagccagcgggggtgccagagatcctgaagaagagtctccatagctgttcagtgagagga
ggagaggagctcttcatcatagggaagaacttcctcaaaggaaccaaggtcatcttccag
gagaacccagccgatgataactcgtggcaggccggggcagagattgacatggagctgttc
catcagaaccatgtggtcgtgaaggttcctccgtaccacagcctgtctgtctcctctcct
gtctctgtgggtgtctacatcatgaccaacgccgggaggtcacatgacatccagcccttc
acatataccccagactcagaaaactccctgaacatgtctgtgaagacagagggctcttct
ctggtcaaggcctgcaccttccatgaccagatcaattctctggtctctgaccctgcccag
tctgctggtgaactggtcaaacgacaggaggtcacacctatggaggtctccagcaatacc
ccatccaaagcactcttcaagcaaccctctgacacccttatcttagtccagcagaccctt
gacctgagctccagcgccccgcctagcaatgagtccttccctagccccatgcccctccag
cctggggacgtggacctccctcaggcccccgtctttccctccctggagcccctcggcacc
atccagaagcaggacatcgcccccatcacctccttccctgtctccagcgacactaccacc
ctcccccctgtccccccagaggtaccccagcagttcctccgggacccccaggagagcctg
cctcaagaggcctccagctccagcagcggggtgatggtagtaggaatgtcccagatggcg
cccccctcccaggccccccagctggagagggcggtaagggagctccaggcggggggcagc
agcctggtacagcaagttctagaggcagcagtggcccagcagcaactcaactcagtgttg
tacagccccacgccctccactgacaccctgcagcaaaacgtacaggacaccatgaacagc
ctgagactggggtgcactgagggctctctggccacacaacaacacctacagatacaacaa
cagcagcagcagcagatacaacaacagttgcaacaacagcagatccttggcaacatgcaa
cagcagcagcaacagatacagcagcagcaacagatacagcaacagcagcagcaacagtta
catcaacagcaacaccaagtccttggcaacatacagctacaaccacaattattactacag
ccacaggatcaacaactgcaacagcaacaacagatactggggaacctacaacagcaacaa
ttacaacatcaacagtttcaacaacagcagcagcaggtcctaggcaacatacagctacag
gatcaacaacaactactgggcaacctacaacaacaaaaccaagcagtaggcaacatgcaa
cagttacaacagcagcagcaacaacaacaacagttacagcagcagcagcaacaacaacaa
cagttacaacagcagcagcaacaacaacaacagttacaacagcagcagcaacaacaacaa
cagttacagcagcagcaggtgttggagaacttccagcagcagctccaggctgagctcctc
cagccccagatccactgctcgtctcagccccagcagcagcagcctgtgtctctcctccag
caggctggggagctgctcaccatccagacctccagcttcccccagcagcccccctcccac
acctctcccccccagcagctcctccagtcccccaggcctctgtcggagacccccagccca
cagcaccaggtccaggccgccctgcttcagaacactttgactgtgctgaccagtggtagc
ctagatcatgagcagcaggtcacggggtcaacacttttcctctctcccaacacactctct
aaccagggtagtcagcaacagctagcattcctgtcctccatggagacttcagccagtgag
cctcagactgtgtcagtgttccagcctcagacccagcagcagcagcagagcacccccatg
gaccaacagcagtccccccagcagacacaaccacagcaaacccagcagcagcttcccatg
gctcagcagggctccttgttccagactagcactctgtcccccagccagcaccctcagccc
cagcccgcagacctgctcctctgcaccgcctccctcaacccccaggctctacccccagcc
ctcctcttcagtacccaggcccagagcccctccatgggcagcagcagcacccctcacccc
caggacacccctgctcccctcctgttctcccagcccaccatggtggggatcagggtaggg
gtggcccagtctgacccagcagagcccatgtccttccaggaccagagctccacagtaggg
gggacccctgcctccatcaatccctctcagcagggcctgttccaggggcagcagccaatg
caggtgggctccagctcaggcagtggccctgccagtcagcaggtggagctgttcctgcca
cagggttctctgtctggtctgcagagcagcatggccacgcaggaactagaaaaccaggct
gcagcagctgcaaccatctttgtgatgcagagcgggctgggggtggtggggctgcagagt
accacctcctcccccggtcagagacccccagagcagctgttccagacgggagtgagcggg
aacgtcagccagccaggaggacaacccaacctgtttgtgttcggcctccagaatgattcc
tcccagctgatgacgtcctctggtcctacactatcagcccagggccaaccccagaacccc
aaccctgtgcaggcaagccacatccagtctctactggacccaaacatatcccagacagcc
acacccatgcagactaaccttcagacacccatgcaaagtagtctacaaaacaccatgagt
agcttagaaaacgccatgcagaccaacctacagaccccaatgcagacaaacacacatact
gcaatgcagaccaatatacagactgccatagaaactagcctgccaaccctcatgcagacc
aacgtccagactagcttacagaacgccatacagaccaacatgcagacgtccatgagcacc
tcccagaacatggagaagatggaggacctgctggagagtctacagaaacagtga
DBGET
integrated database retrieval system
