Coregonus clupeaformis (lake whitefish): 121576375
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Entry
121576375 CDS
T08357
Name
(RefSeq) genetic suppressor element 1
KO
K27276
genetic suppressor element 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121576375
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
121576375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3736
Motif
Other DBs
NCBI-GeneID:
121576375
NCBI-ProteinID:
XP_041745397
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Position
11:8657522..8686842
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AA seq
1222 aa
AA seq
DB search
MSHESKSRSLGMISTATHTTATVNPLTPLANGSAAAQSAHSGFAAALRQLAKQAEDPRGS
SPNSESPVSSPATSLSSPVNTPKRGLSGPLQTRGHSLPSTPPVVTIAPTPTKTSSILWIG
EGRQAESGVRGVSWERVGSEPSLPQEKGAHPVPSPHILAHPSYPFSLTPSSVMQDRRLQG
LSLPGQVHPAVSSGAVQEEYLRGLRPFATSDDLRLRSLPLGLDPTTAAHVTAAAAYYHPA
YLHHLHRMEESLCLSALRSQFYSVPAGGAFPHLHPAALHMHLPGARYPGEFSHTHSALAE
RTQMEEELRQREREREREREKQRERELEQEREKERERERETEMERQKDRQRERERERERE
RERERERERQMVRAVKSQYLAGLKALTALPEDRVRPGERLTPNRLDKPTLPALPVPKPLQ
PGLQSAPHLMPSLVPSQTGNTHTASASSGGLHGTLASAVMLQQANGEERRLARQRRQGQE
REVWPPVEGVEPRRDSYRSNVSQRDTGNRESQPHLGAPPPLISPKHHPHLLPHPPAPPTT
LWNPASLTETPPDPHRRFDSPVPPSRSPPGLTRTERSPSWERVEDRCRKMGKGPERFSSV
RGPILQEPGLWGMAELEGSTHSLHHHHNHHHNHLHQRGSLSLSSPSPSSNLGVQRQASSP
SPTMDLQRSERPGQEPQNPVVYDEILQQHRRLVSKLDLEESRRREAREGGYYYDLDESYD
ESDEEEVRAHLRRVAEQPPLKLDTSSEKVCFLRVCGLTTLAHRDQLLHQKRRKRRRMLRE
RSTSPPAVRGKRKTPPPPVAPAPPLSTTLTPEEMNCTPHLEDKKDFLNMFSLSHVTSQQR
RDKEKMEGLLKAIKLKSVTLDTIRYNPLPLYRSPPVSPTGESNGLHYPDSPSPSPPYPHP
PNNLYTDPLKPSTPPPRQPPPLAPKPNSKGLGGGHPAKRLQDLQNGAGHPGHHPQQKVPL
AVRNGQNKPWERFIPKDFHQTALQSTHKTLGGSTCFPESSIKSEPSAPYHIPPLKRPALL
NTSPHPINGHHPYPSPPHHDPLCVRDELSEEEDDEEEEGEAPRKWRGIESVFEAYQEYVD
ERGMERQVLHSQCRRLETQNYTLSLTAEQLSHSMAELVSQRQRVRDERERLQAQLELFRK
CLTIPNVHWGKGQAKGCPSPVTPCPAPDRQTDRQTDGRPMTDGEREDTELVPSLRQRGKR
ALDWEGREDDRKEGGRKGGQAL
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgagccatgagtcaaagtcgcggtcattaggaatgatctccacggcaactcacaccaca
gcgacggtcaatcctcttaccccactagccaatgggagtgcggctgctcagtctgctcac
tccggattcgctgccgctctccgtcaactggccaaacaggctgaagaccccagaggttct
tctcccaatagtgagtctccagtctcctctccagccaccagtctcagttctccagtcaac
actcctaagagggggttgtcagggccgctccagacccggggacacagccttccctccacc
cctcctgtagtcaccatcgcccccactcccaccaagaccagcagcattctctggatagga
gaagggcgccaggctgagtcaggtgttcggggggtgagttgggagcgtgtggggtctgag
cccagccttccccaggagaaaggggctcatcctgtcccctctcctcacatcctggctcac
ccatcctaccccttcagcctcacccccagctctgtaatgcaggaccggcgactacagggc
ctcagtctacctggtcaggtacaccctgcagtttcctcaggggcggtccaagaggagtac
ctaagaggactccgccccttcgccacctcagatgaccttcgcctgcgctcgctgcccctg
gggctcgaccccaccaccgctgcccatgttactgctgctgctgcctactaccaccctgcc
tacctccaccacctccacaggatggaggagtctttgtgtctttctgcactgcggtctcag
ttctactctgtaccagcagggggggccttccctcacctccaccccgctgccctccacatg
cacctgcctggggcacgctaccctggggagttcagccacacacatagtgcactggctgag
agaacacagatggaggaagagcttcgccaacgagagagggagcgagagcgtgaacgagag
aaacagagggagcgtgagctggaacaggagagagagaaggagcgggagagagagagggag
acagagatggaaagacagaaagataggcagagggagagagagagggagagagagagggag
agagagagggagagagagagggagagacagatggtgagagcggtgaagagccagtacctt
gctgggctgaaggctctcacggctctgccggaggacagggtcagacctggggagaggctg
acacctaacagactggataagcccaccctccctgccctcccagtacctaaacctcttcag
ccaggcctccagtcagcccctcacctcatgcccagcctggtgccctctcagacggggaac
acacacactgcctcagcctcttccggggggctccatggaacactggcctctgccgtgatg
ctccaacaggccaatggggaggagcgcaggttggcacggcaacgccggcagggacaggag
agggaggtgtggccacctgtggaaggggtggagcctaggagagacagctacaggtccaac
gtcagccaacgtgacacaggcaatagagagtctcaaccccacctaggagccccacctcca
ctcatctcacccaaacatcaccctcacctccttccccacccccctgcccctcccaccacc
ctctggaaccctgcctccctcactgagacccccccagacccccatcgcaggttcgactcc
cctgttcctccatctcgctcccctcctggcctgaccagaaccgaacggtcccccagctgg
gagagggtggaggataggtgcaggaagatggggaagggcccagagaggttctcgtctgtc
aggggacccattctgcaggagcctggcctctggggcatggctgagctcgaaggatccact
cacagtctccaccaccaccataaccaccaccataaccacctccaccagaggggctcgctg
tccctctcctcccccagccccagctccaacctgggtgtccagcgccaggccagctcccca
tctcccaccatggacctccagaggtctgaacggccaggccaagagcctcagaacccagtg
gtgtacgatgagattctccagcagcaccgcaggctggtcagcaagctggacctggaggag
agcaggaggagagaggccagggaaggagggtattactatgatctagatgagtcatatgat
gagagtgatgaggaggaagtgagagcccacctcagaagggtagcagagcagcccccctta
aaactggacacatcctcagagaaggtgtgttttctgcgtgtgtgtggcctgaccacgctg
gcccatcgtgaccagctgcttcaccagaagaggaggaagaggaggaggatgttgagagag
cgcagcacctcccctccggcagtacgaggcaagaggaagacccctccgcctcctgtggca
cccgctccccccctcagcaccactctcaccccagaggagatgaactgcaccccccacctg
gaggacaagaaagacttcctcaacatgttcagcctgtcccatgtgaccagccagcagagg
agagataaggagaagatggaggggttgctgaaggctataaagctgaagagtgtgacgttg
gacaccatcagatacaacccattacccctctatagaagcccccctgtttccccaactggt
gaatcgaacggactccactacccagactccccaagcccctcgcccccctacccccacccc
cccaacaacctctacacagacccgctaaaaccctccacccctccaccccgccaaccccct
cccctggcccccaaacccaacagtaaaggattgggcggaggtcacccagctaagaggctc
caggacctccagaatggagcaggccaccctggccatcatcctcaacagaaggtgcccctg
gctgtgcggaacgggcagaacaagccatgggaaagattcatcccgaaggacttccaccag
actgcgttacagtctacccacaagacactgggtggctccacctgctttcccgagtccagt
ataaagtctgagccgtcagcgccctaccacatccccccactgaagagaccagccctcctc
aacacatccccacaccccatcaacgggcatcacccttacccctctccaccccaccatgac
cccctttgcgtacgggacgagctgtcagaggaagaggatgatgaagaggaggagggggaa
gcccctaggaagtggaggggcatagagtcagtctttgaggcttatcaggagtatgtggat
gagcggggtatggagagacaggttcttcacagtcagtgccggaggctggagactcagaac
tacactctcagtctgacagctgaacaactctcacacagcatggcggagctggtgagtcag
agacagagggtgagagatgagagagagaggctgcaggctcagctggagctcttcaggaag
tgtctgaccattcccaacgtgcactggggcaaggggcaggccaaaggttgcccctccccg
gtgaccccctgccctgctccagaccgacagacagacagacagacagacggacgaccaatg
accgatggagagagagaggacactgaactggttcccagtctgaggcagagagggaagaga
gctctggactgggaaggaagagaggatgatagaaaagaaggagggagaaaaggaggacag
gctctgtag
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