Coregonus clupeaformis (lake whitefish): 121576411
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Entry
121576411 CDS
T08357
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04810
Regulation of actin cytoskeleton
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121576411 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121576411 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121576411 (cyfip1)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121576411 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
121576411 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
MauJ
CsiV
Motif
Other DBs
NCBI-GeneID:
121576411
NCBI-ProteinID:
XP_041745456
LinkDB
All DBs
Position
Unknown
AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSLMYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGHDELLAD
IVNLCVDYYENRMYLTPNEKHMLLKVMGFGLYLMDGNNSNIYKMDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKNRWSCTSSGSSPQYNICEQMVQIKEDHMRFI
SELARYSNSEVVTGSGRQEAHKTDQEYRKLFDLALQGMQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYSSEEKFSLVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFAQLTLRDPLRQAIKRKKNVVQSVLQAIRKTICDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADRSGSKKTLRSSLEGPTIVDMEKFHRESF
FYTHLLNFSDTLQQCCDLSQLWFREFFLELTMGGRIQFPIEMSMPWILTDHILESKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRADCKNQGANIPWPASNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALYKSL
ELAINRFESEDLTSIVELEGLMDINRMTHKLLCKFLTLDSMDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKPPNAQPQYLYGSKALNLAYSS
IFGFYRHFVGPPHIKAMCRLLGYQGIAVVIEELLKVVKSLLQGTIMQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNALLFCLLSEQSLTQEEVC
DLLHAAPFQNILPRIHVKEGERLDAKMKRLEAKYTALHLVPLIERLGTPQQIAITREGDL
LTKERLCCGLSMFEVILTRVRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIISLLGQQRRFDILDFSYHLLKVQKHDGKDEIIKSVP
LKSMAERIHKFQVLNDEIYAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacggtgaccctggaggatgctctgtccaatgttgaccttctggaagagctg
cctctcccagaccagcagccctgcatcgagcccctgccctcctccctcatgtaccagccc
aacttcaacaccaactttgaggaccgtaatgcgtttgtgacggggatcgccagatacatc
gagcaggccaccgtccactctagcatgaatgagatgctggaggagggccaggagtatgca
gtgatgctgtacacatggaggagctgctctcgcgctatcccacaggtgaagtgtaatgag
cagcccaacagagtggagatctatgagaagaccgtggaggtgctggagcctgaggtcacc
aagctcatgaacttcatgtacttccagcgaacggctatagaccggttctgtggggaggtg
cgccgtctctgccacgctgagaggaggaaggactttgtctcggaggcctacctcctgacc
ttggggaagttcatcaacatgttcgctgtgctggatgaactcaagaacatgaagtgtagc
gtcaagaacgaccactccgcatacaaacgagctgcccagttcctcaggaagatgtcagaa
ccctcatccatccaggagtctcagaacctctccatgtttctggccaaccacaacaagata
actcagtctctgcagcagcagttggaggtgattaacggccacgatgagctgctggctgac
atagtcaacctgtgtgttgattactatgagaacaggatgtacctgacccccaacgagaaa
cacatgctgctcaaggtgatggggtttggtctgtacctgatggatggcaataacagcaac
atctacaaaatggacgccaagaagaggatcaacctgactaagattgacaagttcttcaag
cagctgcaggtggtgcctctgtttggtgacatgcagattgagctgtccagatacatcaag
accagcgcacactttgaagagaacaagaaccggtggtcatgtacctcatcaggcagcagt
cctcagtataatatctgtgagcagatggttcagatcaaggaagaccacatgaggttcatc
tctgagctggctcgctacagcaacagtgaggtggtgacagggtctggtcgtcaggaggcc
cacaagacagaccaggagtacaggaagctgtttgacctggctctgcaggggatgcagctg
ctatcccagtggagcgcacatgtcatggaagtgtactcgtggaagctggttcatccaact
gataagtactctaacaaggagtgtcctgacaacgcggaggagtatgaacgagctacacga
tacaattactccagcgaggagaagttctccctggtcgaggtgatggccatgataaagggt
ttgcaggttctgatgggtcgtatggagtctgtgttcaaccacgctatccgccacaccatc
tactcggccctgcaggacttcgcccagctcaccctgagagacccgctacggcaggccatc
aagaggaagaagaacgtggtacagagtgtcctgcaggccatcaggaagaccatctgcgat
tgggagactgggcgtgagccacacaatgaccccgccctgcgaggagagaaagaccccaag
ggaggctttgacatcaaggttccccgccgcgccgtgggcccctccagcacacagctgtat
atggttcgtaccatgctggaatctctgatagctgataggagtggttctaagaagactctc
cgcagcagtctggagggacccaccatcgtggacatggagaagttccacagagagtccttc
ttctatacacacctgctgaacttcagtgataccctgcagcagtgctgtgacctgtctcag
ctgtggtttagagagttcttcctggagctgaccatgggtggcaggatccagttccccatc
gagatgtccatgccctggatcctcacagaccacatactggagtccaaggaggcctctatg
atggagtatgtgctgtactctctggacctctataatgacagcgcccactatgcactgacc
aagttcaagaagcagttcctctacgatgagattgaagcagaggtcaacctgtgttttgat
cagtttgtctacaagctggctgatcagatatttgcctactacaagattctagctggaagt
ctgctgctggacaagcgtctgagagcggactgtaagaaccagggagccaacatcccctgg
cccgcctccaaccgctacgagaccctgctgaaacagcgccatgtacagctgctgggtcgt
tccatagacctgaaccgtctgatcacccagagggtgtctgctgctctctacaagtctctg
gagctggccatcaaccgcttcgagagtgaagatctcacctccatcgtggaactagaaggt
ctgatggacatcaaccgtatgacccacaagctgctgtgtaagttcctgacgctggacagt
atggacgccatgttccgggaggccaatcacaacgtctccgccccctacggacgcatcaca
ctccacgtcttctgggaactcaactacgacttcctccccaactactgttacaacggctct
actaacaggtttgtccgcacggtcctgcccttctctcaggagttccagagggacaagcca
cccaacgcccagccccagtacctgtacgggtcaaaggctctgaatctggcgtacagcagt
atctttggtttctacaggcactttgttggtcctcctcacatcaaggccatgtgtcgcctg
ctggggtaccagggcatcgctgtggtcatagaggagctgctcaaagtggtcaagagcctg
ctccagggaaccatcatgcagtatgtgaagaccctgatggaggtgatgcctaagatctgc
cgtctcccacgccacgagtacggctccccgggtatcctggagttcttccaccaccagctg
aaggacatagtggagtacgctgaactgaagacggtctgcttccagaacctcagagaggtg
ggcaatgccctgctgttctgtctgctcagcgaacagagcctgactcaggaggaggtgtgt
gacctgttacatgccgcaccattccagaacattcttcccaggatccatgtcaaggagggt
gagcgtcttgatgccaagatgaaacgtctggaggctaaatacacagccctgcacctggtt
cccctgatagaacgcctgggaacccctcagcaaatagccattacccgtgaaggtgacctg
ctgaccaaagagcgtctgtgttgtggcctgtccatgttcgaggtcatcctcacacgtgtc
cgcggtttcctggacgaccccatctggcgcggcccgttgcccagcaacggcgtgatgcac
gtggacgagtgtgtggagttccaccggctgtggagcgccatgcagtttgtttactgcatt
cctgtaggagctcacgagttcaccgtggagcagtgtttcggagacggtctccactgggct
gggtgtatgatcatctccctactgggtcaacagagacgctttgacatcctggacttcagc
tatcacctgctgaaggtgcagaaacacgacggaaaggatgagatcatcaagagtgtgcct
cttaaaagtatggcggagagaatccacaagttccaggttctcaacgatgagatctacgcc
attctgaacaagtacctgaagtcaggcgatggggaaaatatgcctgtggagcatgtccgg
tgcttccagcctcctatccaccaatccctggccagcaactga
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