Coregonus clupeaformis (lake whitefish): 121576413
Help
Entry
121576413 CDS
T08357
Name
(RefSeq) ubiquitin-protein ligase E3A-like isoform X1
KO
K10587
ubiquitin-protein ligase E3 A [EC:
2.3.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121576413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121576413
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121576413
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
HECT type E3
121576413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
AZUL
Motif
Other DBs
NCBI-GeneID:
121576413
NCBI-ProteinID:
XP_041745461
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MKRAAAKHLIERYFRQLTEGCGNGACTNEFCASCLGFQPLDHNTAAIRALELWKMGTKLC
DPHPSAAHPSAAHPSAAFPDNNSAKETQPALLGDRPGKMTDHKDRLLPPREDFREVHYLT
EEKVYEILSICEGKKDYSPLIRVIGRIFSSAEGLVQSFRKDKEQHPNTKEQRKTHQAKDE
DKDEDDKERTSAMEQESEESEASASMAGATGATENTLGPVEVSVDIEAVRRVYDRLLSNE
KMEAAFLNALVYLTPNVELELTYLDVYDTNPDYLNIFIIVMENSNLHSPEYLETAMPLFC
KCMSKLPLPARAKLTRLWSQYSVEHIRSMMETFQQLITYTVISSEYDSDSLVNDDEGVVA
ATKCLKLVFYANVLGGDLDTGHNEEEEEEPPSESSELTLQELMGEERRNKKGPRVDPLEK
ELGVRTLDCRRPLIPFEEFVNEPLNDVLEMDKDFTFFKVDSESKFSFQTCPFILNACTKS
LGLYYDNRISMYSERRITALYSLVQGQQLNPYLRLKVRRDHIIDDALVRLEMIAMENPAD
LRKQLFVEFEGEQGVDEGGVSKEFFQLVLEEMFNPDIGEMFNSDIGMFTYDESTKLFWFN
PSSLENEAQFSLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTYLDLADSHPVQYQSL
KELLEYEGNVEEDMMITFQISQTDLFGDPITYDLREHGDKIPVSADNRKEFVSLYGDYML
NKSVERQFKAFRRGFRMVTNESPLKCLFRPEEVELLICGSRNLDFQALEETTEYDGGYSR
DCRVIKDFWETVHSFGEEDKRLFLQFTTGTDRAPVGGLGKLKMIIAKNGPDTDRLPTSHT
CFNALLLPEYDSKEKLKERLLKAITYAKGFGML
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagcggctgcaaagcatctaattgagcggtactttcgccagttaacagagggc
tgtggaaatggggcctgcaccaacgagttctgtgcttcgtgtcttggttttcaaccgctg
gatcacaacacagcggctatcagagccctggagctgtggaaaatgggcaccaaactgtgt
gaccctcacccctccgctgctcacccctccgcagctcacccctccgctgccttccctgac
aacaacagtgccaaagagacacaacctgccttattgggcgaccgccccgggaagatgaca
gaccacaaagaccgcctgcttccccctagggaagacttcagagaggtgcattacctgacc
gaggagaaggtgtatgagatcctgagtatctgtgaggggaagaaggactactctcctctg
atccgagtcatcgggaggatcttctccagcgcagagggtctggtgcagagcttcaggaaa
gacaaggaacaacaccccaacaccaaggagcagcgcaagacccaccaggccaaagatgag
gacaaggacgaggacgacaaggagagaaccagcgccatggagcaggaatcagaggaatcc
gaggcctcggcgtccatggcgggagcgacgggagcgacggagaacacactgggtcctgta
gaggtttcagtggacatagaagctgtcaggagagtgtacgacagactcctctccaacgag
aagatggaagcagccttcctcaacgcgctggtctacctgacccccaacgtagagctggag
ctaacctatctagacgtctacgacaccaacccagactacctaaacatcttcatcatcgtg
atggagaacagcaacctccacagcccagagtacctggagacggctatgcccctgttctgt
aagtgcatgagtaaactcccgctgcctgcccgggccaagctgacgcgcctgtggtctcag
tacagtgtagaacacatcagaagtatgatggagaccttccagcagctcatcacctacacg
gtgatcagcagtgagtacgacagcgacagtctggtgaacgatgacgagggcgttgtggct
gccaccaagtgtctgaagctggtgttctacgccaacgtgctgggaggtgacctcgatacg
ggccacaacgaagaggaggaggaggagcctccgtctgagtccagcgagctcaccctgcag
gagctcatgggggaggagaggaggaacaagaaggggccccgggtcgaccctctggagaag
gagctgggcgtcaggacactggactgtagacggcccctcattcccttcgaggagtttgtc
aacgagccgctgaacgatgttctagagatggacaaggacttcaccttcttcaaggtggac
tccgagagcaagttctccttccagacctgcccattcatcctcaacgcctgcacaaagagc
ctgggtctttactacgacaaccgcatcagtatgtacagcgagaggaggatcactgccctc
tacagcctggtgcaaggacagcagctcaacccatacctccggctcaaagtacgacgagac
cacatcatagacgacgccctcgtcaggttggagatgatcgccatggagaacccagcggac
ctgagaaagcagctgtttgtcgagtttgaaggagagcagggcgtcgacgagggaggggtg
tccaaagagttcttccagctggtgctggaggagatgttcaaccctgatattggtgagatg
ttcaactctgatattggtatgtttacgtatgatgagtccaccaagctgttctggttcaac
ccgtcctctctggagaacgaggcccagttctccctgataggcatcgtcctgggcctggcc
atctacaacaactgcatcctggatgttcactttcccatggtggtctacaggaaactgatg
gggaagaaaggcacctatctggacctggcagactcacacccggttcagtaccagagtctg
aaggagctgctggagtatgaggggaacgtggaggaggacatgatgatcaccttccagatc
tcacagactgacctgtttggagaccccatcacttacgacctgagggaacacggggacaag
atacctgttagtgcggacaataggaaggagtttgtctctctgtatggtgattacatgctc
aataagagtgtggagcgccagttcaaagccttcagaaggggcttccggatggtcaccaac
gagtcgccactcaagtgtttatttagacctgaagaagtggagctactcatctgtggaagc
aggaatttagactttcaagcacttgaagaaacgaccgagtatgacggcggctacagcaga
gattgtcgcgttatcaaagacttctgggagacggtgcactcgtttggtgaggaggataag
aggctgttcctccagtttactacagggaccgacagagcaccagtaggaggcctgggcaag
ctgaagatgatcatcgccaagaacggccccgacacagacaggttacctacttctcacacc
tgttttaatgctttgctgctccctgaatacgattcgaaggagaagctgaaggagagactt
ctcaaagccatcacttatgccaaaggatttggaatgctgtga
DBGET
integrated database retrieval system
