Coregonus clupeaformis (lake whitefish): 121576483
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Entry
121576483 CDS
T08357
Name
(RefSeq) microtubule-associated protein 1S
KO
K10429
microtubule-associated protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121576483
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121576483
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121576483
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121576483
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
121576483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
121576483
NCBI-ProteinID:
XP_041745583
LinkDB
All DBs
Position
11:complement(36685261..36726785)
Genome browser
AA seq
1390 aa
AA seq
DB search
MATQQTEEVEAMENVNRTLHPGFSNDRYSLLVIVGEHSRTGLVDYVVAEIERGIRSWDVD
LTACNLDEQLKLFVSRHSAFFSEEIKGQRTLQHSGDVLDTQVMVNPSHELVCSEVRRLIS
DVSRHKLLVLAGQCVEEAGDLVLQTGCFSLSDFIQIFADEEIGELLSSADPTQKASLTLS
CPNSGVWKNSVLEKHNLQDFIDIKTNPPSVLPEMEGLQEFTEYLSESLEPQSPFELLEPP
STVGFLKLSRPCCYVFPGGRGDSAFFAVNGFNILVNGGSDSRSCFWKLVRHLDRVDSLLL
THIGADNLPGVNSLLQRKAVELEEEPSTDSQINENWMKNLISPEIGVVFLNAPERLKSFR
GDPKELRSCDQVALTLQHLERLTINPEPLSRSNGPSIEPLILFQKMGVGRLELYILNPVK
GSKDLDAFMKTWPGNGSNTKGSEIPLSCLVSISALLVWHPASPQEKIIRVLFPGCTPQAK
ILEGFEKVKHLEFLKHPAVSLRDLEASKSDIQPKRAESRESLKSLPKDSRPSSALLKDKV
GRGDVKKQDMKTKPKAQNDIANKEGKEGEEKSKLKDGDAKQRPPKAEKLMTKKEPLKDEK
KEVKKKDEKASAGVAKKEENLEKKKEAVKKEPLGPRPKKDIKHDQKKAIKKEVKPEEKKP
TKPLNKDVKKATTGPSFGNTEAKLLGKNGTLKKDAIPKRDALNKAAKPKTGKKEPENQKS
SASEGDADRSKMSTPEDMTAEFEKLRAENGKSEKKTAVVVNTIADSEGIEQPATENGSSG
NAERGDILESPQKFSCMETLSNPEKALGTTSPLAKTPKIDRSVNFILTPTEYRLLDGALR
NGQEDACASSDEKTLELVSPANSAPNSAGHTPFHKSPEEDAQGSGEDSSLRGRVPSLGFE
DCHVIGSCRNSEVGSLRGNLENLDKQSSLLTLSPFMLPDSVSPNITSMPAEIGSPHSTEV
DESLSVSFEQVLPSIDESPKGDHVDKSYSNGHFADSDPKMGMSLPLSTSHNMRPPGDGSE
ERLPGLQGLLPDVPHDVDLCLVSPCEFKHPKSPENQQQHLSLGLATGSPRELSEDSNHSQ
ELAKPQSRINSDRHSPQGQETPPTSVSESLNTATDSDIPPGTEDCPSITADMDSDEDSGN
FPPHHPHDHPSSHSSNRGAQHSSQDPPPAPMKDLPPLPPQPGTCMADPEADDPSKTSKSA
ATKTKKPAGFIQRLTSATSTTLNSKTKAGSTTATLKTTSSLDTRPSSRNTTSGSRPGTAK
SASSGSLGSKVSAAGIAPVYLDMAYLPSGCASATIDVEFFQRLRSSCYIISGDEPLKESV
MRPILDALLEGKTAWPDVQVTLIPTFDSLTMHEWYQETHERQRELGITVLGSNSTVAMQE
ETFPACKVEF
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacaacaaactgaagaggtggaagcaatggaaaatgtgaaccgaactttgcat
cctggcttcagcaacgacaggtattctctgcttgtcattgtcggtgaacatagtcggact
ggacttgtggactacgtggttgcggagatagagcgaggcatccgctcatgggacgtggac
ctgacagcctgtaacctggacgagcagctcaagctctttgtgtcgcgacactctgccttc
ttctcagaggaaataaaaggtcagaggacactgcagcacagtggagatgttctggacacc
caggtgatggtgaacccatcccatgagttggtctgctcagaggtgcgccggcttatatct
gatgtgtctcgccacaagttgttggtccttgctggacaatgtgttgaagaggcaggagac
ctggtcttacaaacaggatgtttctctctcagtgacttcattcagatatttgctgatgag
gagattggagagttgttgagctctgcagaccccacacaaaaagctagcctcacgctgagt
tgtcccaactctggggtgtggaagaactctgtgttggagaagcacaacctacaagacttc
atcgacatcaaaacaaacccaccatcagtgctacctgaaatggaaggtctgcaagagttc
acagaatacctctcagagtccctggagccacagtctccgtttgagctgctggagcccccc
agtactgtgggcttcctcaaactctcccgcccctgctgctacgtatttccaggtgggaga
ggagactccgctttctttgctgttaacggtttcaacatcctggtcaatggtgggtcagat
tctcgctcctgtttctggaaactggttagacatttagacagagttgactccctgctcctc
acccacattggtgccgacaatctgccaggggtgaacagtcttctccaaaggaaagcagta
gaactggaggaggaaccgtctactgactctcagatcaatgagaactggatgaaaaatcta
atttcccctgagattggtgtcgttttccttaatgctccagagagattgaagtcattccgg
ggtgatcccaaagaactgaggagctgcgatcaagtggcactcactttgcaacaccttgaa
aggctaacaatcaatccagaacctcttagtcgctcaaatggacccagcattgagcctctt
attcttttccagaagatgggagtcggtagactagagctgtacattcttaacccagtcaaa
ggcagtaaagatcttgatgctttcatgaagacctggcccggcaatggatctaacacaaaa
ggctcagagatacccctgtcttgccttgtctccatctccgctctactggtgtggcatcct
gccagtcctcaagagaagatcattcgagttctcttccctgggtgtactccgcaggccaag
attcttgaaggatttgagaaagtaaagcatctagaattcctgaaacatccagccgtgagc
ctcagggaccttgaagcatccaaatcagatatacaaccaaaacgtgcagagagtcgggag
agccttaagtccctgcccaaggattcaagacctagcagtgccttgctgaaggacaaagtt
ggacgtggggacgttaaaaagcaagacatgaagaccaaacccaaggcccaaaatgacatt
gctaataaagaagggaaagaaggggaagagaagtccaaattgaaggatggggatgctaaa
caaagacctccaaaggctgaaaagcttatgacaaagaaagaacctttaaaggatgagaaa
aaagaagtaaaaaagaaagatgagaaagcctccgcaggtgttgccaaaaaggaagagaat
ttggagaaaaagaaagaagcagttaagaaagaacctcttggtccaagaccaaagaaagac
atcaaacatgatcaaaagaaagcgatcaagaaggaggtaaagccagaggagaagaaacca
acaaaacctctcaacaaggatgtcaaaaaagcaacaactggaccttcatttggaaacaca
gaggcaaagctcttaggtaagaatggaacattgaagaaggatgcaatccccaagagagac
gcattgaacaaggcggcaaagccaaagactggtaaaaaggagccggagaatcaaaaatct
tctgcctctgagggggatgctgatcgttccaagatgtcaacacctgaagacatgacagcg
gaattcgagaagctcagagcagaaaatggaaagtcagagaaaaagactgctgttgtagtg
aacactatagctgacagtgaaggaatagagcaacctgcgacagagaatggatcaagcggt
aatgcagaaaggggggacatcttggaaagtccacaaaagttcagctgcatggagacgctg
tcaaatccagagaaagccctgggaaccacttcgcctctcgccaaaactcctaaaattgac
cgcagcgtgaactttattctcacaccaactgaatacaggcttcttgatggggccttgaga
aatgggcaagaagatgcatgcgccagctcagatgagaagactttagagttggtctcccct
gccaactcagcccctaatagcgctgggcatacacctttccacaaatcacctgaagaggat
gctcagggctctggtgaggacagtagtctcaggggaagggtgcctagccttgggtttgaa
gactgccacgtcattggttcttgcaggaactcagaggtaggctccttgagggggaacctt
gaaaacttggacaaacaatcaagccttttgacactgagtcccttcatgctgcctgactct
gtctcgcccaatattacctccatgcctgctgaaatcggttccccacactcgacagaagtt
gatgagtctctttccgtgtcttttgaacaggtgctcccatctattgatgagtcacccaag
ggagaccatgtggacaagtcctactcaaatgggcattttgcagattctgaccccaaaatg
gggatgtccttacccttgagtacatctcataacatgcgtccaccaggggacggctcagag
gaacgccttcctggactacagggtcttctccctgacgttccccatgatgttgacctctgc
ctggtctcaccctgtgaattcaagcacccaaagtccccagagaaccaacagcagcatctg
tctctagggctagccaccggtagcccgcgagaactctcagaagacagcaaccactcccag
gagctagctaagccacaaagcagaattaatagtgatcgacattcacctcaaggccaggag
acccctcccacgtctgttagtgaatccctcaacacagccacagattcagacataccccct
gggactgaagactgcccctccatcactgcagacatggactctgacgaggactctgggaat
ttcccgccccaccatccacatgaccatcccagctctcactcctccaacaggggagcgcaa
cattcctctcaggaccctcccccagccccaatgaaggatctacctcctttgccgccccag
cccggtacctgcatggctgaccctgaggctgatgatccaagcaagacctcaaagagtgct
gccacaaaaaccaagaaaccagccgggttcatacagaggttaacgtcagccaccagtaca
actctgaacagtaagaccaaggctggcagcacaactgctacattgaagaccacctcaagc
cttgacacaaggccttcatcccgcaataccactagtggctccagacctggaactgcaaag
tcagcttcttcaggttctctgggcagtaaggtcagtgcagctggaattgcaccagtgtat
ttggacatggcttatctcccctctggttgtgcctctgccaccattgacgtggagttcttc
caacgcctgcgctcctcctgctacatcatcagtggcgacgagcccctgaaggagtcagtc
atgagacccattctcgacgccctactggagggaaagacggcctggcccgatgtgcaggtg
accctgatccccacctttgactcgctgacgatgcacgagtggtaccaggaaacccatgag
aggcagagggagctgggtatcaccgtgctgggcagcaacagcactgtggccatgcaggag
gagaccttccctgcctgcaaagtggagttctga
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