KEGG   Coregonus clupeaformis (lake whitefish): 121576501
Entry
121576501         CDS       T08357                                 
Name
(RefSeq) WD repeat-containing protein 47
  KO
K24746  WD repeat-containing protein 47
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
    121576501
Domain-containing proteins not elsewhere classified [BR:cclu04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   121576501
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_WDR19_1st LisH_TPL Beta-prop_EML Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_WDR75_1st TPR1-like_2nd Beta-prop_NUP159_NUP214 WD40_RFWD3 WD40_MABP1-WDR62_1st LisH_WDR26 EF-hand_FSTL1 Beta-prop_SPT8 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 121576501
NCBI-ProteinID: XP_041745621
LinkDB
Position
11:18974032..19006883
AA seq 891 aa
MTAEETINIKEVEVIKLMLDFLNSRKLHISMLALEKESGVINGLYSDDMLFLRQLILDGQ
WEEVIQFIQPLEGMDKFDKKRFRYIVLKQKFLEALCVNNAMSAADDPQNLELSMQEAVKC
LHSLEVFCPSKDDYSKLCLLLTLPCLTQHAEFKDWNPSTARVHCFEEACAMVAEFIPADR
KLSEAGFRASGNRLFQLLIKGVLYECCVEFCQSKATGEEITEDEVLLGVDVLCGNGCDEL
DLSLLSWLQNLSPGAFSCAFQQKTLAIHVDPLVKPTKAGHADLLTPLISRLSPCPSSPLQ
RPQSADTYMSRSLNPALDGLSHGLAAQTQNKRGTEGSVRPALSQSMVENNVRQLDDDSPE
RIVPPVLASSGPNVMRTPLAPGTDGGPPNEKEHDSEQVQEYYRQRKRVQQHLEQKQQQRQ
LYQQMLLEGGVHTQEGPDAQNTLTWREHNLTETFLNRSIQKLEEMNVGMDNVGEEGGVQS
VSQQCNGSPGPDSSTQTQETGPLRDKPGGVSSTPLMAGSQGMPSFDESPVQNTRSAQRNR
APLPTLQDDSGGSPMRNNSQKMEKPKAQFVAVNSLEDTQALRAVAFHPTGALYAVGSNSK
TLRVCAYPDTLNTSGPGPVKQPVVLFRRNKHHKGSIYCVAWSHCGQLLATGSNDKYVKVL
PFNAETCNATGPDLEFSMHDGTIRDLAFMEGPESGGSILISAGAGDCNIYTTDCQRGQGL
HALSGHTGHILSLYAWGGWMIATGSQDKTVRFWDLRVPSCVRVVGTALHGSGSAVASVAV
DPSARLLATGQEDCSCMLYDIRGGRMVQTYRPHTSDVRSVRFSPEAHYLLTGSYDNKVII
TDLQGDLTKQLPLTVAAEHGDKVIQCRWHTHDLTFLSSSADRTVKLWAQCP
NT seq 2676 nt   +upstreamnt  +downstreamnt
atgacagcggaggagaccattaacatcaaggaggtggaggtgatcaaactgatgctggac
ttcctcaactccaggaagctccacatcagcatgctggccctggagaaggagagcggcgtc
atcaatggcctttactctgatgacatgctcttcctcaggcagctgattctagatggccag
tgggaagaggtcatacagttcattcagcctttagagggcatggacaagtttgacaaaaag
aggttccgctacatcgtcctgaaacagaaatttctggaagccttgtgtgtgaataacgcc
atgtcagctgccgacgaccctcagaatctggagctgtccatgcaggaagcggtcaagtgt
ctccacagcctggaggtgttctgcccctctaaagacgactacagtaaactctgcctgctc
ctcaccctgccctgcctcacccaacacgctgagttcaaggactggaaccctagcacggcc
cgggtgcactgcttcgaggaggcctgcgccatggtggctgagttcatccctgccgacagg
aagctgagcgaggctgggttcagggcctcagggaaccgcctcttccagctgctcatcaaa
ggagtgttgtatgagtgctgtgtggagttctgtcagagcaaagctacgggggaggagatc
acagaggacgaggtgctcttgggcgtggacgtgctgtgcggcaatggctgcgacgaactc
gacctctccctgctctcgtggctccagaacctctcgccaggcgccttctcctgcgccttc
cagcagaagaccctggccatccacgtggatcccctcgtcaagcctaccaaggccggccac
gccgacctgctcaccccactcatcagccggctttccccctgtccctcctcgcccctgcag
aggccccagtcggcagacacctacatgtcgcggtccctgaacccggcgctggacgggctg
tcccatggcctggctgcccagacccagaacaagaggggcacggagggcagcgtgaggcca
gcgctcagccaaagcatggtggagaataacgtgcgccagctggacgacgactcgccagag
aggattgtcccaccggttctggcctccagtggaccaaatgtcatgcgcaccccactggca
ccggggacggacggtgggccaccaaatgaaaaagagcatgacagtgagcaggtccaggag
tactacaggcagaggaaacgtgtccagcagcacctggagcagaagcagcagcagagacag
ctgtaccagcagatgctcctggaggggggggttcacacacaggaggggccagatgcccag
aacaccctcacctggagggagcacaacctcacagagacgttcctcaacaggtccatccag
aagctggaggagatgaacgtggggatggacaatgtgggggaggaggggggggtccagtct
gtgagccagcagtgtaacgggagccctggacccgactccagtacccagacccaagagaca
ggccccctcagggacaagccggggggggtcagcagcacccctctcatggcagggtctcag
ggcatgccctccttcgacgagtcccccgtccagaacactcgtagtgctcagaggaacagg
gcccctctgcctacacttcaggatgactccggcggctccccgatgcgcaacaattctcag
aagatggagaagcccaaggcccagtttgtggctgtgaacagtctggaggacacgcaggcg
ttgcgcgcggtggccttccaccccacgggggcgctgtacgccgtgggctccaactccaaa
accctgcgcgtctgtgcttacccagacaccctcaacacaagtgggccaggcccagtcaag
cagccggtggtgctcttcagaaggaacaagcaccacaagggttccatctactgtgtggcc
tggagtcactgtggacaactgctggccacaggctccaatgataaatatgtcaaagtgctg
cccttcaacgcagaaacctgcaatgccacagggccagacctggagttcagtatgcacgac
ggcaccatcagagacctggcgttcatggagggtccagagagtggagggtccatcctgatc
agcgccggggccggagactgtaacatctacaccactgactgccagagaggacaggggcta
cacgctctcagtgggcatacaggccacatcctgtctctgtacgcgtggggggggtggatg
atcgccacaggctcccaggataagactgtccgcttctgggacctgagagtgcccagctgt
gtgagggtggtggggacagccctgcatggctctggcagtgcagtggcctcggtggctgtg
gaccccagcgctcgtctcttggcaacgggccaggaggactgcagctgcatgctctatgac
atcagaggaggccggatggtgcagacttaccgcccacacaccagcgacgtgcgctccgtc
cgtttctcccccgaggcacactatctgctcacgggttcctacgacaacaaagtcataatc
actgacctgcaaggtgacctgacgaagcagcttcctctgacggtggcggcggagcacggg
gacaaggtcatccagtgtaggtggcacacgcacgacctcaccttcctgtcctcctccgca
gacaggacagtcaaactctgggcccagtgtccatga

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