Coregonus clupeaformis (lake whitefish): 121576501
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Entry
121576501 CDS
T08357
Name
(RefSeq) WD repeat-containing protein 47
KO
K24746
WD repeat-containing protein 47
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121576501
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
121576501
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
LisH_TPL
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_WDR75_1st
TPR1-like_2nd
Beta-prop_NUP159_NUP214
WD40_RFWD3
WD40_MABP1-WDR62_1st
LisH_WDR26
EF-hand_FSTL1
Beta-prop_SPT8
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
121576501
NCBI-ProteinID:
XP_041745621
LinkDB
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Position
11:18974032..19006883
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AA seq
891 aa
AA seq
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MTAEETINIKEVEVIKLMLDFLNSRKLHISMLALEKESGVINGLYSDDMLFLRQLILDGQ
WEEVIQFIQPLEGMDKFDKKRFRYIVLKQKFLEALCVNNAMSAADDPQNLELSMQEAVKC
LHSLEVFCPSKDDYSKLCLLLTLPCLTQHAEFKDWNPSTARVHCFEEACAMVAEFIPADR
KLSEAGFRASGNRLFQLLIKGVLYECCVEFCQSKATGEEITEDEVLLGVDVLCGNGCDEL
DLSLLSWLQNLSPGAFSCAFQQKTLAIHVDPLVKPTKAGHADLLTPLISRLSPCPSSPLQ
RPQSADTYMSRSLNPALDGLSHGLAAQTQNKRGTEGSVRPALSQSMVENNVRQLDDDSPE
RIVPPVLASSGPNVMRTPLAPGTDGGPPNEKEHDSEQVQEYYRQRKRVQQHLEQKQQQRQ
LYQQMLLEGGVHTQEGPDAQNTLTWREHNLTETFLNRSIQKLEEMNVGMDNVGEEGGVQS
VSQQCNGSPGPDSSTQTQETGPLRDKPGGVSSTPLMAGSQGMPSFDESPVQNTRSAQRNR
APLPTLQDDSGGSPMRNNSQKMEKPKAQFVAVNSLEDTQALRAVAFHPTGALYAVGSNSK
TLRVCAYPDTLNTSGPGPVKQPVVLFRRNKHHKGSIYCVAWSHCGQLLATGSNDKYVKVL
PFNAETCNATGPDLEFSMHDGTIRDLAFMEGPESGGSILISAGAGDCNIYTTDCQRGQGL
HALSGHTGHILSLYAWGGWMIATGSQDKTVRFWDLRVPSCVRVVGTALHGSGSAVASVAV
DPSARLLATGQEDCSCMLYDIRGGRMVQTYRPHTSDVRSVRFSPEAHYLLTGSYDNKVII
TDLQGDLTKQLPLTVAAEHGDKVIQCRWHTHDLTFLSSSADRTVKLWAQCP
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggaggagaccattaacatcaaggaggtggaggtgatcaaactgatgctggac
ttcctcaactccaggaagctccacatcagcatgctggccctggagaaggagagcggcgtc
atcaatggcctttactctgatgacatgctcttcctcaggcagctgattctagatggccag
tgggaagaggtcatacagttcattcagcctttagagggcatggacaagtttgacaaaaag
aggttccgctacatcgtcctgaaacagaaatttctggaagccttgtgtgtgaataacgcc
atgtcagctgccgacgaccctcagaatctggagctgtccatgcaggaagcggtcaagtgt
ctccacagcctggaggtgttctgcccctctaaagacgactacagtaaactctgcctgctc
ctcaccctgccctgcctcacccaacacgctgagttcaaggactggaaccctagcacggcc
cgggtgcactgcttcgaggaggcctgcgccatggtggctgagttcatccctgccgacagg
aagctgagcgaggctgggttcagggcctcagggaaccgcctcttccagctgctcatcaaa
ggagtgttgtatgagtgctgtgtggagttctgtcagagcaaagctacgggggaggagatc
acagaggacgaggtgctcttgggcgtggacgtgctgtgcggcaatggctgcgacgaactc
gacctctccctgctctcgtggctccagaacctctcgccaggcgccttctcctgcgccttc
cagcagaagaccctggccatccacgtggatcccctcgtcaagcctaccaaggccggccac
gccgacctgctcaccccactcatcagccggctttccccctgtccctcctcgcccctgcag
aggccccagtcggcagacacctacatgtcgcggtccctgaacccggcgctggacgggctg
tcccatggcctggctgcccagacccagaacaagaggggcacggagggcagcgtgaggcca
gcgctcagccaaagcatggtggagaataacgtgcgccagctggacgacgactcgccagag
aggattgtcccaccggttctggcctccagtggaccaaatgtcatgcgcaccccactggca
ccggggacggacggtgggccaccaaatgaaaaagagcatgacagtgagcaggtccaggag
tactacaggcagaggaaacgtgtccagcagcacctggagcagaagcagcagcagagacag
ctgtaccagcagatgctcctggaggggggggttcacacacaggaggggccagatgcccag
aacaccctcacctggagggagcacaacctcacagagacgttcctcaacaggtccatccag
aagctggaggagatgaacgtggggatggacaatgtgggggaggaggggggggtccagtct
gtgagccagcagtgtaacgggagccctggacccgactccagtacccagacccaagagaca
ggccccctcagggacaagccggggggggtcagcagcacccctctcatggcagggtctcag
ggcatgccctccttcgacgagtcccccgtccagaacactcgtagtgctcagaggaacagg
gcccctctgcctacacttcaggatgactccggcggctccccgatgcgcaacaattctcag
aagatggagaagcccaaggcccagtttgtggctgtgaacagtctggaggacacgcaggcg
ttgcgcgcggtggccttccaccccacgggggcgctgtacgccgtgggctccaactccaaa
accctgcgcgtctgtgcttacccagacaccctcaacacaagtgggccaggcccagtcaag
cagccggtggtgctcttcagaaggaacaagcaccacaagggttccatctactgtgtggcc
tggagtcactgtggacaactgctggccacaggctccaatgataaatatgtcaaagtgctg
cccttcaacgcagaaacctgcaatgccacagggccagacctggagttcagtatgcacgac
ggcaccatcagagacctggcgttcatggagggtccagagagtggagggtccatcctgatc
agcgccggggccggagactgtaacatctacaccactgactgccagagaggacaggggcta
cacgctctcagtgggcatacaggccacatcctgtctctgtacgcgtggggggggtggatg
atcgccacaggctcccaggataagactgtccgcttctgggacctgagagtgcccagctgt
gtgagggtggtggggacagccctgcatggctctggcagtgcagtggcctcggtggctgtg
gaccccagcgctcgtctcttggcaacgggccaggaggactgcagctgcatgctctatgac
atcagaggaggccggatggtgcagacttaccgcccacacaccagcgacgtgcgctccgtc
cgtttctcccccgaggcacactatctgctcacgggttcctacgacaacaaagtcataatc
actgacctgcaaggtgacctgacgaagcagcttcctctgacggtggcggcggagcacggg
gacaaggtcatccagtgtaggtggcacacgcacgacctcaccttcctgtcctcctccgca
gacaggacagtcaaactctgggcccagtgtccatga
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