Coregonus clupeaformis (lake whitefish): 121576528
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Entry
121576528 CDS
T08357
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S isoform X1
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121576528
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121576528
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121576528
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121576528
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121576528
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Type II RPTP family
121576528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
Ig_3
I-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Tc-R-P
PTP-SAK
DSPc
V-set
PTPlike_phytase
Y_phosphatase3
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
121576528
NCBI-ProteinID:
XP_041745673
LinkDB
All DBs
Position
11:complement(21368063..21759535)
Genome browser
AA seq
1919 aa
AA seq
DB search
MAAGGPPCLSLPALLPLSTLLLCMLLTGFHALSPPRFTKVPVDQIGVSGGVVSFVCQATG
DPKPRVSWNKKGKKVNSQRIETIEFDEGAGAVLRIQPLRAPRDENIYECVAENSEGEVNV
NAKLSIIREDLLPVGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPIDPN
ASNGRIKQLRSGALQIENSEETDQGKYECVASNVEGVRYSSPANLYVRELREVRRVPPRF
SIPPTSHEMMPGGSVNITCVAVGSPMPYVKWMLNSEDLTPEDEMPVGRNVLELNGVRESA
NYTCVAMSSLGIIEAVAQITVKSLPKPPGTPMVTETTATSVTITWDSGNPDPVSYYIIQY
RAKSPDSKFETMDGITTTRYSIGGLYPNTEYEIRVSAFNTIGQGPPSAPVETRTGEQAPA
SPPRNIQARIISQNTMMVRWDEPEEPNGQIKGYRVYYTMDPSQPMSLWQIHNVQDSIITT
IQSLVASETYTIRVLAFTSVGDGPFSDPIHVKVLQGVPGQPTKFQVGAVSDTSMELTWEP
AFQKEGIISFELRYKEGSFGSQVTKTFGPTATYVVEGLRANTEYYFSLAAISNKGIGAFT
NEISQKTLQAKPSAPPQDVKCSSSSSTTLLVSWRPPPVESQNGALAGYLVRYQVVGASVE
GGGAGEPMEEPAVLPSDGKVLLQKLEKWTQYSVTLAAFTEIGPGPESEPLLCRTDEDVPG
APPRRVEVEVLNSTALKVMWRSLLPGRQHGQIRGYQVHYVRVENGESRGLPLIKDVMLAD
AQEMVIGGLQSDTTYSITVAAYTTKGDGARSKSKLVVTKGAVPGPPYLSVAQDSETSAVV
CWDTPDVMIPGMELQGYRLQFGRKDVSPLATLEFTPQERQYTVASVHRGATYLFKVQAKS
RGGFGEEATAELQVPEHTPQGYPQISESSNVTCCSVELAWSPPVLAERNGDITEYTLAYQ
ETGVGGTPRELSLPASQSTYVLNSLKPNSAYDVKIRAHTSVGPGPYSPPIQYRTVAFQTD
VPKNFTVKWVTKTTVLLTWTFVERRFPFRCTIEYNRQKMDVDARLTKALVTSLRPNTTYE
FRVTCQENTESGPRHRVVARTAPPILVKKPKLDLYSEPDNILTMGFAPVESKGIKDFYVV
AVPLKKGLGTGRHLKNPDEMDLEELLRDITPKRRTRRQLSQADGKKPYITACFKQLPTTF
TLGTEHRHSSCESKPLEPGQEYVFFLLAELNTTAGKMFAASPYTDSVVTPELEVDPLPME
TGGDGLIWVVGPVLAVVFIICIVIAILLYKNSKPDSRKRKDSEPRTKCLLNNAEITPHHP
TDPVEMRRINFQTPGMMNHPPIPIAELAEHTDLLKANDNLKLSQEYESIDPGQQFTWEHS
NLEVNKPKNRYANVIAYDHSRVILAPIEGITGSDYINANYIDGYRKQNAYIATQGPLPET
FGDFWRMVWEQRAATVVMMTRLEEKSRIKCDQYWPSRGTETYGMTQVTLLDTIELATFCV
RTFSLHKVRNGSGDKREVRQFQFTAWPDHGVPEYPTPFLAFLRRVKTCNPPDAGPIIAHC
SAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRSQRNYMVQTEDQYSFNHDSLLEAV
ACGDTEVAARSLFSYIQKLAQVETGEHVTGMELEFKRLANSKAHTSRFISANLPCNKFKN
RLVNIMPYETTRVCLQPIRGLEGSDYVNASFIDGYRQQKAYIATQGPLAETTEDFWRMMW
ENNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDAR
DGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGV
FTTLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDEYQFCYQAGLEYLGSFDHYAT
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggtggtccaccctgcctctctctgccagccctgctgcccctcagcactctg
ttgctctgtatgctgctcactggcttccatgccttatcaccaccaaggttcactaaagtt
cccgtcgaccagattggcgtatccgggggtgtggtctcgttcgtgtgccaggcgacagga
gaccctaagccccgggtgagctggaacaagaaggggaagaaagtcaactcccagcgcatt
gagactatagagttcgacgagggcgccggcgccgtccttcggatccagcctctacgagcg
ccgcgggacgagaacatctacgagtgcgtggcggaaaatagcgagggtgaggtcaacgtc
aacgccaagctctccatcatcagagaggacttgctcccggtagggttccccaacatagac
atgggtccacagctgaaggtagtcgagcggacccggacagccaccatgctctgtgctgcc
agcggcaaccccgacccagaaatcacctggttcaaggacttcctgcccatagaccccaac
gcaagtaacgggcgaatcaaacagctgcgctcaggcgccctgcagattgagaacagcgag
gagacggaccaggggaagtacgagtgcgtggcgtctaacgtggaaggcgtgcgctactca
tcccctgctaacctatatgtgcgagagcttcgagaagtccgccgcgtgccccctcgcttt
tccatcccgccgaccagtcacgagatgatgccaggtggcagtgtgaacatcacctgcgtg
gcggtagggtcgcccatgccctacgtcaaatggatgctgaactcggaggacctgacgccg
gaagacgagatgccagtgggccggaatgttctggagctcaacggcgtgcgagagtctgcc
aactacacgtgtgtggccatgagcagtctgggcatcatcgaggcggtggcgcaaattact
gtcaagtccctgcccaagcccccaggcacccccatggtgaccgagaccacggccaccagt
gtcaccatcacctgggactccggtaacccggaccccgtttcctactacatcatccagtac
cgcgccaagtctcccgacagcaagtttgagaccatggacggcatcaccactacgcgatac
agcatcgggggcctctaccccaacaccgagtacgagatccgcgtctctgcctttaacacc
atcggccagggcccccccagtgcgccggtggaaacccggaccggggaacaagccccggcc
agtccgccccgcaacatccaggcccggatcatctcccagaacaccatgatggtgcgctgg
gacgagcctgaggagcccaacgggcagatcaaagggtaccgggtgtactacaccatggac
ccgtcccagcccatgagcctatggcagatccataatgtccaggatagcattatcaccacc
atccagagccttgtggcgtctgagacgtacaccatccgtgtcctggcctttacctcggtg
ggcgacgggcccttctctgaccccatccacgtcaaagtgctacaaggagtccccggacag
ccaacaaagttccaggttggtgctgtgtccgacacaagcatggagttgacctgggaacct
gccttccagaaagaggggatcatcagctttgaactccggtacaaagagggcagttttggc
agccaggtgaccaaaaccttcggccccactgctacatacgtcgttgagggtctgcgggca
aacacggagtactacttctctctggctgccatttccaacaaaggcatcggagccttcacc
aacgaaatatcccagaaaaccttgcaagccaagccctcagccccccctcaagacgttaag
tgcagcagctccagctccactaccctgctggtaagttggcgccccccgcctgtggagagc
cagaatggtgccctggcggggtacctagtgcgctaccaggtggtgggagcctccgtcgag
ggcggtggtgccggggagcccatggaggagccagccgtgctgcccagtgacgggaaggtg
ctgctgcagaagctagagaagtggacccagtacagcgtcaccctggccgccttcactgag
atcgggccgggcccagagagcgagcccctgctctgccgcaccgacgaggatgttcccgga
gctcctcctaggcgggtcgaggtggaggtgctcaactccacggcgctcaaggtcatgtgg
cgctccctgttgccggggcgacaacacggccagatccgtggttaccaggtgcactatgtg
cgtgtggagaacggggagtcacgcggcctgcccctcattaaggacgtcatgcttgccgac
gcccaggaaatggtcatcggagggctccagtcggacaccacctactccatcacagtagct
gcgtacaccacaaagggagacggggcacgcagcaaatccaaactggtggtaaccaaagga
gcagtgcccgggccaccctatctgtcagtggctcaggattcagagacgtcggctgtggtg
tgctgggacacacccgatgttatgatccctggcatggaactgcagggttaccggcttcag
tttggccgtaaggacgtgtcccccctggctactctggagttcaccccccaggagaggcag
tacacggtggctagtgtccaccgcggcgccacctacctcttcaaagtacaggccaagagt
cgggggggcttcggggaggaggcgacagccgaactgcaggtgcccgaacacacaccccag
gggtacccccaaatcagcgaaagctccaatgtgacctgctgctcggtggaattggcatgg
tcgcccccggtgctggcagagcgcaatggagacatcacggagtacacgctagcataccag
gagacgggtgtggggggcacgccccgggaactcagcctgcccgccagccagtccacctac
gtgctcaacagcctcaaacccaactcggcgtacgacgtgaaaatccgcgcgcacacgagt
gtaggtccagggccctacagcccgccgatccagtatcggactgtggcgtttcagacagac
gtcccaaagaacttcacggtcaagtgggtaaccaagacgacggtgttgctaacatggacg
tttgtagaaaggcggttcccattccggtgcacgatcgagtacaaccgtcagaagatggac
gtggacgccaggctgaccaaggcgctggtcaccagcctgcggcccaacaccacctatgag
ttccgggtcacgtgtcaggagaacacggagagtggacctcgccaccgtgtggttgctagg
accgcaccacccatcctggtcaagaagcccaagctggacctctactcggagccggacaac
attctgaccatgggcttcgcccctgtggagagcaagggcatcaaggatttctatgtggtg
gcggtaccactaaagaagggtttggggactggacgccatctcaagaacccagacgaaatg
gacttggaagagctgctgagggacatcaccccgaagcgtcgcaccaggcgccagctgagc
caagcggacggcaagaagccctacatcacggcctgcttcaagcagctccccaccaccttc
accctgggcacagagcaccgccacagcagctgtgagagcaaacctctggagcccgggcag
gaatacgtcttcttcctgctggccgagctcaacaccaccgccgggaaaatgtttgcggcc
agcccatacacggactcagtggtgaccccagagctggaggtggatcctctgcccatggag
acgggtggggacggcctcatctgggtggtggggcccgtcctggccgtggtcttcatcatc
tgcatcgtcatcgccatcctcctctacaagaacagcaaacctgacagccgcaaacgaaag
gattcagagcccagaacaaaatgtctgctgaacaacgcagagatcaccccccaccacccc
acagacccagtggagatgagacgcatcaacttccagaccccaggtatgatgaatcatccc
cccatacccattgcggagctggctgaacacacggatcttctcaaagctaacgacaacctg
aagctctcccaggagtacgagtccattgatccaggccagcagtttacgtgggaacactcc
aacctggaggtgaacaagcccaaaaaccgctacgccaacgtcatcgcctatgaccactcc
cgcgtcatcctcgcacccatcgaaggtatcaccggcagtgattatatcaacgccaactac
atagacggctacaggaaacagaatgcctacatcgctacgcagggtccgctgcccgagaca
ttcggggacttctggaggatggtgtgggaacagagggcagccactgtggtcatgatgacc
agactggaggagaaatcacggatcaagtgtgaccagtactggcccagtcgaggcacagag
acctacggtatgacccaggtgaccctactggacaccatagagctggccaccttctgcgtc
cgcaccttctccctgcacaaggtacgaaatggctccggtgacaagcgggaggtccgtcag
ttccagttcacggcgtggcccgaccacggggtccccgagtaccccacccccttcctggcc
ttcctccgccgggtcaagacctgtaaccccccagacgcaggccccatcatcgcccactgc
agtgcgggcgtgggtcggacgggctgcttcatcgtgatcgatgccatgctggagcgcatc
aagcacgaaaagacagtggacatctacggccacgtgaccctgatgcgatcgcagcgtaac
tacatggtgcagacggaggatcagtacagctttaaccacgactcgctgctggaggcggtg
gcgtgcggcgacacggaggtggcggccaggagcctgttctcctacatccagaagctggcc
caggtggagacgggcgagcacgtcaccggcatggagctggagtttaagcgcctagccaac
tccaaggcccatacgtccaggtttatcagtgccaacctgccctgcaacaagttcaagaac
cgcctggtgaacatcatgccctacgagaccacccgtgtctgcctgcagccaattaggggc
ctcgagggctccgactacgtcaatgccagcttcatcgatggatacaggcaacagaaggcc
tacatcgctacgcagggccctttggcagagaccacagaggacttctggaggatgatgtgg
gagaacaactccactattgtagtcatgctcaccaaactccgagagatgggcagggaaaag
tgtcatcagtactggcctgccgagcgttcggccaggtatcagtactttgtggtggacccc
atggctgagtacaacatgccccagtacatcctccgagagttcaaagtcaccgacgcaagg
gatgggcagtccaggacagtgcggcagttccagttcactgattggccggagcagggggtg
cccaagtcaggggagggattcatagacttcataggccaggtgcacaaaaccaaggagcag
tttggccaggatggacccatctctgtccactgcagtgcgggggttggccggaccggtgtc
ttcaccacgctcagcatcgtgctggagaggatgcgctacgaaggcgtggtagacatcttt
cagacggtcaagatgctgcggacacagaggccggccatggtccagacagaggatgaatat
cagttttgctaccaggcgggtctggagtacctaggaagctttgatcactatgcaacgtaa
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