KEGG   Coregonus clupeaformis (lake whitefish): 121576531
Entry
121576531         CDS       T08357                                 
Name
(RefSeq) lysine-specific demethylase 4B-like isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121576531
Enzymes [BR:cclu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     121576531
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     121576531
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121576531
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H JmjN PHD DUF4537 Tudor_3 Tudor_5
Other DBs
NCBI-GeneID: 121576531
NCBI-ProteinID: XP_041745683
LinkDB
Position
11:complement(22493518..22577808)
AA seq 1185 aa
MSLEAPPDPPATMSLEAPAPDLSPELAADSAPELAPELTPDTAPDLAADSAPVPVMNPGC
KIMTFRPTMEEFKDFAKYVAYMETQGAHRAGLAKVIPPKGWKPRQSYDVIEEMTIPAPIM
QVVTGQSGLFTQYNIQKKSMTVGEYRQLANSRKYCTPRHKDFDDLERKYWKNLTFVSPIY
GADVSGSIYDSEISEWNIGHLNTLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDM
DLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPGSSQGCDAFLRHKMTLISPSILKK
YSIPFDRVTQEEGEFMVTFPYGYHAGFNHGFNCAESTNFATLRWIDYGKMATQCTCRKDM
VKISMDVFVRCLQPERYVQWKQGKDGTVLDHQRPTTLTSPELEHWRANRVTYRQKLLQRA
LQKKEQLRRLKLEEVKVLAEEGIELDAAEYQRQVEEREAQRRQEREERMAREALQTLEAM
EREDREREEQERQDRERQDDVADQATGVQDPQADPRHLTANGEKRKKKKKKKKQQPTPPP
VPINSFQAAFEKFATFNMPPKEPQDTNDTEIPAEGRLDVKDMQQQSSFYSKQLKMEVKKS
RRHPLSKPPMRSPLSIVKQEMSSDEELFSPLPLDGHVKKAGHLWQNRTPNILAEKSFNAA
VATLEPYCAVCTLFCPYTQPQKDSLYPSDSPSAPNHPHAPRCGSRTHPLVPEMCFSAGPD
NTEPLPSNSHTGEDCTSLLLSCSSCSLQVHASCYGVSLDTVHDESWMCSRCTALAWTADC
CLCNLRGGALKMTTDNRWVHVICAIAVAEARFVNAIAREPVDISAIPESRKVLRCVYCHK
NTKQMCGACIQCSHDSCSTSFHVTCAHIAGVVMKPADWPYVVSVTCHKHKKTNHKARAGP
RGEFSLGQKVIGRNNDGWFYPCTVIGMTSQTFYEVNYDDGSFCDNMFPENVVSHDCLRNG
PPETGELMLVHTMEGQVLNASYVKEHVHKHYQVEFQDESQLLLKQTEIHSLEQDLPKRVC
TRLAIPTQEALLSGDEPQAAKRPRLPAPHPPPLTPMDPGCHPPATGPVPHSIAPPTPSHA
PGPPNTDISALTLTQALAIAIPEPTLTPMPTLADPLPAPSALAAPLPPLSPAVPCQDQGE
GYTPSSMPFQDQGEGYTPSSSYVSYMETLLNAHFPTQEEGPGPLF
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgtcgctggaagcgcccccagatccacctgccaccatgtcgctggaagcaccagcacca
gacttatccccagaactagctgcagattcagccccagaattagcccctgagctaacacca
gatacagccccagacctagctgcagattcagctccagtcccagtaatgaacccagggtgt
aagatcatgaccttccggcccaccatggaggaattcaaggactttgccaaatacgttgcc
tacatggagactcaaggagcacaccgtgcaggcctggcaaaggtgattccccctaagggc
tggaagccgcggcagtcatacgatgtcatcgaggagatgacgatccctgctcccatcatg
caggtggtgactggccagtcaggcctctttacccagtacaacatccagaagaagtccatg
accgttggggagtaccgccaactggccaacagcagaaagtactgtaccccccgacacaag
gactttgacgacctggagaggaagtactggaagaatctcaccttcgtgtctccaatctac
ggtgctgacgtcagcggctccatctatgactcagagatcagtgagtggaacatcggccac
ctgaacacgctgctagatatggtggagcaggagtgtggcattgtgatcgagggagtgaac
acaccctacctgtactttggcatgtggaagaccacctttgcctggcacaccgaggacatg
gacctctacagcatcaactacctgcactttggagagcccaagtcctggtacgccatccca
cctgagcacgggaaaaggctggagaggctggctcaaggtttcttcccaggcagttcccag
ggctgtgacgccttcctccgccacaagatgactctcatctccccgtccatactgaagaag
tacagcatccccttcgacagggtcactcaggaagaaggcgagttcatggtcacctttccc
tatggctaccatgccggtttcaaccacggcttcaactgcgccgagtccaccaactttgcc
accctgcgctggattgactacggcaagatggcaacacagtgtacgtgtcgtaaggacatg
gtgaagatctccatggatgtgtttgtgcgctgcctgcagccggagcgctacgtacagtgg
aagcaaggcaaggacggcacggtgctggaccaccagcgacccaccaccctgaccagccct
gagctggagcattggagggccaaccgggtcacctaccgccagaaactgcttcagagagct
ttacagaagaaggagcagctgcggcggctgaagctggaggaggtcaaggtgctggcggag
gaaggcatcgagctggatgccgccgagtaccagcgccaggtggaggagcgcgaggcccag
cggcgccaggagagggaggagaggatggccagggaggccctgcagactctggaggcaatg
gagagagaggaccgggaacgggaggaacaggagagacaggaccgggagaggcaggatgac
gttgccgaccaggccacaggagtacaagacccccaggcagacccgcggcacttgacagcg
aatggagagaagaggaagaagaagaagaagaagaagaaacaacaaccgaccccgccaccg
gtccctataaactccttccaagcagcttttgagaagtttgccacgttcaacatgccccca
aaggagccccaagacaccaatgacacagaaataccagcagagggcaggcttgatgtgaaa
gacatgcagcagcagtcatcgttctactccaagcagctgaagatggaggtgaagaagagt
cgccggcaccccctcagcaagccgcctatgcgctctccgctatccatcgtcaagcaggaa
atgtccagcgatgaagagctgttctcccccttgccactggatggccacgtgaagaaggcg
ggccacttgtggcagaaccgcactcctaacatcctggctgagaagagtttcaatgcggcc
gtggccaccctggaaccctactgtgccgtatgcactctgttctgcccatacacacagccc
cagaaggactctctgtacccgtccgacagccccagtgcccccaaccacccccacgctccc
cgctgcggaagccgcacccacccgctggtccccgagatgtgcttcagcgctgggccggac
aacacagagccgctgccctccaactcccacacgggagaagactgcaccagcctgctgctc
tcctgctcctcctgcagtctgcaggtccacgccagttgttatggtgttagtctggacacg
gtacacgatgagtcctggatgtgttcgcgatgtacagcgcttgcctggacagcagattgc
tgtctgtgtaacttacggggaggcgctctaaagatgaccacagacaaccggtgggtccat
gtgatctgtgccatcgccgtggcggaggctcgcttcgtcaacgccatcgcgagggagccg
gtagacatcagcgccatccctgagagcaggaaggttctgaggtgtgtgtactgccacaag
aacaccaaacagatgtgcggtgcgtgtatccagtgttcccacgacagctgctccacctcc
ttccacgtcacctgcgcccacattgccggcgtggtcatgaagccagccgattggccctac
gtggtgtctgtcacctgccacaagcacaagaagaccaatcacaaggcaagggcggggcca
aggggggagttttctctgggccagaaggtaattggacggaacaacgatggctggttctac
ccctgcaccgtcattggcatgacctcacaaaccttctacgaggtcaactatgatgacggc
tccttctgtgacaacatgttccccgagaacgttgtgagtcatgactgtcttcgtaacggc
cccccagagacaggcgagctgatgttggtccacaccatggagggccaggtgctcaacgcc
tcctacgtcaaggagcacgtgcacaagcactaccaggtggagttccaagatgagtcccag
ctgttactgaagcaaacagagatccactcgctggagcaggacctgcccaagagggtctgc
acccgcctggcaataccaacccaggaagcccttctgtcaggagacgaaccacaggcagcc
aagaggcctcgcctccccgcccctcaccccccacctctcacccccatggaccccggatgc
caccccccagctacaggccctgtacctcacagtattgcacctcccacacccagccatgct
cctggtccccccaacactgatatcagtgcccttaccctcacccaggctctggcaatagcc
atccccgagcccaccctcaccccaatgccaactctcgctgatcctctcccagccccgtct
gccctagccgcccctctgccgcccctctccccagccgtgccctgccaggaccaaggtgaa
ggctacacgcccagctccatgcccttccaggaccagggtgaaggctacacgcccagctcc
agctacgtgtcctacatggagacgctgcttaatgcacacttccccactcaggaagagggc
cccgggcccctgttttaa

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