Coregonus clupeaformis (lake whitefish): 121576537
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Entry
121576537 CDS
T08357
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121576537 (mindy4)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121576537 (mindy4)
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
121576537 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
121576537
NCBI-ProteinID:
XP_041745692
LinkDB
All DBs
Position
11:23444107..23459955
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AA seq
724 aa
AA seq
DB search
MLQIMVVRVEEVAASLVREFLSRKGLKRTIACMDEEHPRTDASINNRSDLRQILHLEGLY
KKNKAQDCPLKSMLEIIVRHHIEGHKEDRTGFNSDVIQTVSTTQNLVTKSPTVTPTVYDN
TRAEENTTGLIFNKTDMSRSLAEVVCSSHGTLSSFEASNTPPTTTQRSIWSHSLSSEGQQ
DRQPVPSFLDNDSSAKRESFSDKNTVVTTESTNKNKTSRLRRGMMAGPVASSPQESNKKR
QTRRLGGPNPLLANDENNKNIRDGSLLTTVQSQRMVTGLTELSTADPMRESQQPRSTLGK
GFDEDGFGFERVGQDKHKTSKTKSMTNQNVDLHMSEMILDDIDDDEELRDLSRVSCHSSS
LPQTTSDSQPMNQHTAIALKELILGSSTSCFSAEWRSQSFTFSDTPDLRYGLVQKKGGPC
GVLASVQACILQKLLFEETGSDAGHQRLRPSGAVRTKCLTLATAEILWRAGEGKKATIAI
TSGRNHFTLTGHRRSEGVLEKITCIHVDNLKDLQLLVEQHIQQFESGALGCILLTISAIL
SRSIDRVREDMDVPTTTLIGAHGYCTQELVNLLLCGQAVSNVFNNNMELDSGNGNLTLLK
GIRGRSDIGLLSLFEHYNICKVGSNLKTPKFPIWVVCSESHFSVLFGVQELLTDQCVLGE
FDLYYYDGLANQQEEICLTVSVGTSGISAGCQDIHTDLIPPLEHCIRTKWKDAIVNWNDT
EPIL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgctacaaattatggttgtacgagttgaagaagttgctgcatcgcttgtgcgggaattt
ctcagtcggaagggactcaagagaacgattgcttgcatggatgaagagcatccccgtaca
gatgccagcatcaataatagatccgacctgcgacaaattcttcacctggaaggtctatat
aaaaaaaacaaggcccaagactgtcccctgaaatcaatgttggagatcattgtaagacat
cacattgaaggacataaagaggacaggacaggcttcaacagtgatgtcatccagaccgta
tcaactacacagaatttggtgacaaagtctccaacagtgacaccaacagtgtatgacaac
accagggcagaagagaacactactggattgattttcaacaaaactgacatgtcaaggtca
cttgcagaggttgtctgttcgtctcatggtacattatcatcatttgaagcgtcaaatact
ccccctacaaccacccagagaagtatctggagccatagcctttcctcagagggccagcag
gacagacagcctgtaccctccttcctagacaatgacagctccgctaagagggaatccttt
tcagacaaaaacacggttgtcaccacagagagtactaataagaacaaaacaagccgcctc
agacgtggcatgatggcaggtcctgtagctagttcccctcaggaatcaaataaaaaacgt
cagactcgacggttgggaggccctaatcctctcctggcaaatgatgaaaacaacaaaaac
atcagagatgggtctctgttgactactgtccagtcacagagaatggttacagggttgaca
gagctctccactgctgaccccatgagagaaagccaacagccacgcagcacactggggaaa
ggatttgatgaagatggctttgggtttgagagagtaggtcaagacaagcacaagaccagc
aaaacaaaatcaatgaccaatcaaaatgttgatctgcacatgtcggagatgattttggat
gatattgatgatgatgaggagttgcgtgatctctcaagagtgtcctgccactcctccagt
ttgcctcaaaccacttctgatagtcaacccatgaaccagcatactgccattgccctgaaa
gagctcatccttggctccagcaccagttgtttcagtgcagagtggaggagtcagagtttc
actttctccgatacacctgatctgagatatgggcttgttcagaagaagggtggtccctgt
ggagttctggcttcagtccaggcttgtattctgcagaaacttctatttgaggagaccggc
agcgatgcagggcaccagagattaagaccctccggtgctgtgagaacaaagtgcctcacg
ttggccactgctgagatcctgtggagggctggggaggggaaaaaagccaccatcgccata
acatcaggaagaaaccatttcacccttacaggacaccgtagatctgaaggagtactagaa
aagatcacatgtattcatgtagataatctaaaggaccttcagttgcttgtggaacagcac
attcaacagtttgagtcaggagccttggggtgtatattgctcaccatctctgctattctc
tccagatctattgaccgggttagagaggatatggatgtccccaccaccacactcatcgga
gcccatggctactgcacacaggagctggtgaatttattgctgtgtggacaggctgtgtcc
aatgtcttcaacaacaacatggagctggattcaggcaatggaaacctgacccttctcaag
ggaataagaggtcgcagtgacattggactgctgtccttatttgaacattataatatatgc
aaggttggttccaacctgaagactcccaagttccctatctgggtggtgtgcagcgagagc
catttcagcgtgctctttggcgtgcaggagctgctgacggaccagtgtgtgctcggggag
tttgacttgtactactacgacggcctagccaatcagcaggaggaaatctgcctaactgtc
tctgtaggtacctcaggaatatctgctggctgccaagatatccacactgatctcattcct
cctcttgaacactgtatacggaccaaatggaaagatgccattgtcaattggaatgacacc
gagcccatcctttga
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