Coregonus clupeaformis (lake whitefish): 121576549
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Entry
121576549 CDS
T08357
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272
Virion - Hepatitis viruses
cclu04382
Cornified envelope formation
cclu04514
Cell adhesion molecule (CAM) interaction
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121576549
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121576549
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121576549
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121576549
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121576549
04147 Exosome [BR:
cclu04147
]
121576549
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121576549
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
121576549
Exosomal proteins of colorectal cancer cells
121576549
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF202
TMEM37
TMEM_230_134
DUF7937
DUF1218
DUF6594
DUF373
Motif
Other DBs
NCBI-GeneID:
121576549
NCBI-ProteinID:
XP_041745716
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All DBs
Position
11:23129481..23132199
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AA seq
217 aa
AA seq
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MTSSAVQLLGYALTLIGLVASMIATNMVEWKRHSYTESTVTSKETYLGLWMSCTVDATKH
TMCVNYKSLFHLPAEILTTRVVMILSVLLSAVGVLVATLGMRCTRCLEEDEEEKDRVAIV
GGFLFIIAGVLAISVTSWFANAIIQSFEFSDSPTSLHNRFEFGNAVLVSWAAGICSVVGG
SLLGCRCLRSCPKGSLSVSSFTQPKVVPGTRLGTHYV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgacgagctctgcggttcaacttctcggttatgctcttactttgatcggtcttgttgcc
tcaatgattgccaccaatatggtggagtggaaaaggcactcttacacagagagcacggta
acatcgaaggaaacttacctggggctgtggatgtcatgcaccgtcgacgccaccaaacac
acgatgtgcgtcaattacaagtcactctttcacctgccagcggagattctgaccacccga
gtggtgatgatcctcagtgtcctgttgtcagccgttggggtgctggtagccacgctgggg
atgagatgcacccggtgcctggaggaggatgaagaggagaaggatagagtagccattgtt
ggaggattcctcttcatcatcgcaggtgttctggccatatcagtaacctcctggtttgcc
aacgccatcatccagtcctttgaattctcagactcacctacctccttacataacaggttt
gagtttggcaatgctgtgctggtgagctgggctgcaggcatctgctctgtggtgggcgga
tctctcctgggctgcaggtgtctgaggagttgtcccaagggctcactctcagtctcatcc
ttcactcaacccaaagtagtccctggcaccaggctcggaacccactatgtttaa
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