KEGG   Coregonus clupeaformis (lake whitefish): 121576549
Entry
121576549         CDS       T08357                                 
Name
(RefSeq) claudin-1
  KO
K06087  claudin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272  Virion - Hepatitis viruses
cclu04382  Cornified envelope formation
cclu04514  Cell adhesion molecule (CAM) interaction
cclu04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    121576549
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    121576549
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    121576549
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    121576549
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cclu03037]
    121576549
   04147 Exosome [BR:cclu04147]
    121576549
Cilium and associated proteins [BR:cclu03037]
 Other cilia and associated proteins
  Stereociliary proteins
   121576549
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   121576549
  Exosomal proteins of colorectal cancer cells
   121576549
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 DUF202 TMEM37 TMEM_230_134 DUF7937 DUF1218 DUF6594 DUF373
Other DBs
NCBI-GeneID: 121576549
NCBI-ProteinID: XP_041745716
LinkDB
Position
11:23129481..23132199
AA seq 217 aa
MTSSAVQLLGYALTLIGLVASMIATNMVEWKRHSYTESTVTSKETYLGLWMSCTVDATKH
TMCVNYKSLFHLPAEILTTRVVMILSVLLSAVGVLVATLGMRCTRCLEEDEEEKDRVAIV
GGFLFIIAGVLAISVTSWFANAIIQSFEFSDSPTSLHNRFEFGNAVLVSWAAGICSVVGG
SLLGCRCLRSCPKGSLSVSSFTQPKVVPGTRLGTHYV
NT seq 654 nt   +upstreamnt  +downstreamnt
atgacgagctctgcggttcaacttctcggttatgctcttactttgatcggtcttgttgcc
tcaatgattgccaccaatatggtggagtggaaaaggcactcttacacagagagcacggta
acatcgaaggaaacttacctggggctgtggatgtcatgcaccgtcgacgccaccaaacac
acgatgtgcgtcaattacaagtcactctttcacctgccagcggagattctgaccacccga
gtggtgatgatcctcagtgtcctgttgtcagccgttggggtgctggtagccacgctgggg
atgagatgcacccggtgcctggaggaggatgaagaggagaaggatagagtagccattgtt
ggaggattcctcttcatcatcgcaggtgttctggccatatcagtaacctcctggtttgcc
aacgccatcatccagtcctttgaattctcagactcacctacctccttacataacaggttt
gagtttggcaatgctgtgctggtgagctgggctgcaggcatctgctctgtggtgggcgga
tctctcctgggctgcaggtgtctgaggagttgtcccaagggctcactctcagtctcatcc
ttcactcaacccaaagtagtccctggcaccaggctcggaacccactatgtttaa

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