KEGG   Coregonus clupeaformis (lake whitefish): 121576570
Entry
121576570         CDS       T08357                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5 isoform X1
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03020  RNA polymerase
cclu04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121576570
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    121576570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cclu03021]
    121576570
Transcription machinery [BR:cclu03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     121576570
SSDB
Motif
Pfam: RPC5 RPC5_C zf-C2H2_assoc2
Other DBs
NCBI-GeneID: 121576570
NCBI-ProteinID: XP_041745744
LinkDB
Position
1
AA seq 743 aa
MHLPVVFSLWVLSYTLVHFRVEEHQLQVGSPEVSCCSSVTSPLTMASEEDDDPIIQEIDV
YLAKSLADKLYLFQYPVRPSSMTYDDITHLSAKIKPKQQKVELEIAINTLSPNYCRSKGE
QIALNVDGTTSEDSNTYSVKMMDKQTFTSIQSTTNTSRYAAAVFRKGELHVTPLQGILQM
RPSFSYLDKADSKHREREAANEGGDSSQDEAEEDVKAVTVRFSRPESEQARQRRIQSYDF
LQKKQAEESWVHLHYHGLNDGRSDHERQYLYCQAMGGSENTELVKTPKEYLAMLMPPVAE
EKIVRPVGPSNMLSMAQLRTLPLGDQIKTLMKNVKVMPFANLMGLLTPGTDSTAVLRCIQ
QVALLVQGNWVVKSDVLYPKNSCSPHSGVPAEVLCRGRDFVMWRFTQERSVMRKEIAAII
KLPPEDVKDFLEHMAVPRINRGWEFLLPSDGDFIKKHPDVAQRQHMLWMGIQSKLEKVFN
FSKEDLVSKKALETETVHVSGEQRLKAAHERARQNQPSLQKDLSARRQGGAGASGGTGVR
VKEEPVSDDEPMDSSSSCSSALPNGLVNGYPSSATCPASNPHNGHGGTPTPSPSPELRDF
VWSTFRKQHVLTLSEVKRLFNLHLASLPPGHSLFHSISDRLLQDTILMSQCKQILVPFPA
QSTAAADEQKVFAVWETGETFDKHRQVLYEIFMKNYRVRRNVIQTRLTQELGDQTTKADM
DRLLKECCVSLGGMWYLKGTLQS
NT seq 2232 nt   +upstreamnt  +downstreamnt
atgcatttgcctgttgtcttttctttgtgggtcttgtcttacacactagtgcattttaga
gttgaagaacaccaactacaggttgggtctccggaggtctcctgttgctcttctgtgacg
tctcccctcaccatggccagcgaggaggacgatgaccccatcatacaagagattgatgta
tacctggccaaaagccttgcggacaagctctatctgttccagtatccagtacgtccttcc
tctatgacctatgatgatatcactcatctatctgccaagatcaagcccaagcagcagaag
gtggagttggagatagccatcaacactctgagtcctaactactgtcgaagtaaaggcgag
cagatcgccctcaatgtggacggaaccacctcagaggactccaacacctactctgtgaag
atgatggacaagcagacgttcacatccatccagtccacgaccaacacctccagatacgct
gctgctgtcttcaggaaaggtgagctccacgtcacgccgctgcagggcatcctccagatg
cgacccagcttctcctatctggacaaggctgacagcaaacacagagagagggaggctgct
aacgaggggggagactcctctcaggatgaggcagaggaggatgtcaaggccgttactgtg
aggttttcccgtcctgagtcggagcaggctcgtcagaggcgtatccagtcgtacgacttc
cttcagaagaaacaggcagaggagtcctgggtccacctgcactaccacggactcaacgac
gggcgttcggaccacgagaggcaatacctgtactgccaggccatgggaggctccgagaac
acagaactggtgaaaacaccaaaggagtacctggcaatgctcatgcctcctgttgcagag
gagaagatcgtcaggcctgtaggtcccagtaacatgctgtccatggcccagctccgaacg
ctgccgctcggtgaccagatcaagacactgatgaagaacgtcaaggtgatgccgtttgcc
aacctgatgggtttgctgacccctgggacagactccactgcagtgctgcgctgcatccag
caggtggcgctactagtgcagggcaactgggtggtgaaaagtgacgtgctgtatcctaag
aacagctgtagtccccacagtggtgtgcctgctgaagtgctgtgtcgaggaagagacttt
gtgatgtggagattcactcaggaacgctccgtgatgaggaaggagattgcagccatcatc
aagctccccccggaggatgtgaaggacttcctggaacatatggcggtgcctcgtatcaac
cgtggctgggagttcctgttgccaagcgatggtgacttcatcaagaagcaccctgacgtg
gcccagcggcagcacatgctgtggatggggatacagagcaaactggagaaggtcttcaac
ttctctaaggaggacctggtatccaaaaaggccctagaaacagaaactgtgcacgtgagt
ggcgagcagcgtctgaaggctgcccatgagcgtgcacggcagaaccagccctctctacag
aaggacctgagcgctcgtcgacagggtggagccggggcgagtggcggaaccggggttcgg
gtcaaagaggaacccgtcagcgatgacgaaccgatggactcatcctcctcttgctcatcc
gcgctccctaatggtttggttaacggttacccctcctccgctacctgccccgcctccaac
cctcataacgggcacggcgggacccccactccctcaccgtcccctgagctgagggacttt
gtgtggagcacgttcaggaagcagcacgtgctgacgctgagcgaagtcaagaggctgttc
aacctccacctggcctccctgcctcccggacacagcctgttccactccatctcagaccgc
ctgctacaggatactatactgatgagccaatgcaaacagatactggtgccttttccagcc
cagagcacggcagctgcggatgagcagaaggtgtttgctgtgtgggagacaggagagacc
ttcgacaagcaccgtcaggtcctgtatgagatcttcatgaagaactaccgggtaaggagg
aacgtgatccagaccaggctgacgcaggagctgggagaccagactaccaaggccgacatg
gaccgcctgctcaaggagtgctgtgtgagcttaggagggatgtggtacctcaagggtacg
ctacagtcctga

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