Coregonus clupeaformis (lake whitefish): 121576578
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Entry
121576578 CDS
T08357
Name
(RefSeq) hepatocyte growth factor-like isoform X1
KO
K05460
hepatocyte growth factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04020
Calcium signaling pathway
cclu04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121576578
04020 Calcium signaling pathway
121576578
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121576578
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121576578
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121576578
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Growth factors (RTK binding)
121576578
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
121576578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kringle
Trypsin
PAN_1
Motif
Other DBs
NCBI-GeneID:
121576578
NCBI-ProteinID:
XP_041745754
LinkDB
All DBs
Position
23:complement(59986796..60016174)
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AA seq
710 aa
AA seq
DB search
MWIYNIIFMLLIIHYSECRRNALQDYQRSDSVRLVQLPDSTLQTKSRKLSIVKCARGCSR
NKRLPFTCRAFLYDQKNRKCQWLSFDRNSPGVHSQHDFNYQLYQKKSYVQECIVGTGVNY
RGRRSVTANGIKCQAWASPIPHEHNFLPRRNRKKDLRENYCRNPDNATSGPWCFTTDHNV
RHQDCGVPQCSQVECVSCNGESYRGPMDHTETGWECQRWDLEEPHKHLFNPKRYPDKGLV
DNYCRNPDGRQRPWCFTMDAHTPWEYCNITACSTDSVVEVDVTTRCFWGRGEGYRGSVAV
TPSGVICQRWDSQYPHNHSYIPQDYHCKDLRENYCRNPDGRDLPWCFTSDPNVRTAFCTN
IPRCGIQNTEPQDCYKGSGESYRGEVSRTRSGLPCSLWSDYSSSSDRDAAVLTVRQEGSF
CRNPDRDTYGPWCYTNSTAIPWDYCSIKPCEPSENTIPQRVEVSCFIHKRTRIVGGAPVA
ITDGSWMVSIQKGSSHWCGGSLIREEWVLTDRQCFSSCVPDLSEYRVWLGVSDLRGSAPN
GSFRQEVSISHVVCGPEGSNLALIRLAQPALPADSVHTIQLPVAGCSISEGTMCSMYGWG
ETKGTGHEGVLKVVHLPMVSNERCREQHRGNLHITDAKICAGGRRDEGVCERDYGGPLVC
QEGESRVIVGVSVHGRGCARANRPGIFINVPFYTQWIHKVFRHYPEPQIN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtggatttacaacattatttttatgctcttaatcatccactattctgagtgcaggagg
aatgcattgcaggactaccagaggagcgacagtgtgcgattggtccagctgccagactcc
accctccagactaaaagcaggaagttaagcatagtgaagtgtgcccggggctgcagccgc
aacaagagactacccttcacctgcagagcattcctgtacgatcagaaaaacaggaaatgc
cagtggctttcgtttgacaggaactcaccaggagtccatagccaacacgacttcaactac
caactctaccagaagaaatcctatgtgcaggagtgcatagtggggacaggagtgaactac
agagggaggaggtcagtaacagccaatggaataaagtgccaggcctgggcctctcctatc
cctcatgaacacaatttcctaccgaggaggaacaggaagaaggacctgagagagaactac
tgtcgtaaccctgacaacgctacctcaggaccatggtgcttcactacagaccacaatgtc
agacaccaggactgtggagtacctcaatgctcacaggtggagtgtgtgagctgtaacggg
gagagctacagaggtcccatggatcacacagagacaggatgggagtgtcagcgctgggac
ctggaggaaccacacaaacacctcttcaaccccaagaggtatcctgataaaggcctggtt
gataactactgtaggaacccagatggacgtcaacgaccgtggtgtttcaccatggacgca
cacacaccctgggagtactgcaacatcacagcctgctccacagacagtgtggtagaggtg
gatgtaactactaggtgtttctggggtcgaggtgagggctacagagggtcagtagcagta
acacccagtggggtgatctgtcaacgctgggactcacagtacccccacaaccactcatac
attccccaggactaccactgcaaagacctgagggagaactactgcaggaaccctgatgga
cgtgacctcccatggtgcttcacttcagaccctaatgttcgcacagcgttctgcactaac
atcccccgctgtggcatacagaacactgaacctcaagactgctacaagggtagtggagag
agctacagaggagaggtttccaggaccaggtcaggtcttccttgttccctctggagtgac
tacagcagcagcagtgacagagatgcggcggtgctgactgtgagacaggaggggagtttc
tgtaggaacccagacagagacacatacggcccctggtgttacactaacagcactgctata
ccctgggactactgcagcatcaaaccatgtgaaccatcagagaacaccattccacagaga
gtggaggtgtcgtgtttcatccataagaggaccaggatagtaggaggagctccagtcgcc
attacagatggaagctggatggtcagcatacagaaagggtccagtcactggtgtggaggt
tctctcatacgagaggagtgggttctcactgacagacagtgtttctcctcatgcgttcca
gacctgagtgagtaccgtgtgtggttgggtgtgtcagacctccgtggctcggctcctaac
ggctccttcagacaggaagtctccatctcccatgtggtctgtggtcctgagggctccaac
ctggccctcatacggctggcccagcctgccctccctgcagacagtgtccacaccattcag
ctgccggtggctgggtgctctatttctgagggtacgatgtgtagcatgtatggatggggc
gagaccaaagggacgggtcatgaaggtgtactgaaggtggtccatctgcccatggtcagt
aatgagaggtgtagagaacaacacagagggaacctccacatcacagacgccaagatctgt
gctggggggaggagggacgagggggtctgtgagagggactatggcggccccttggtgtgc
caggaaggagagagcagggtcatagtgggggtcagtgtccatggcagaggctgtgcccgt
gccaaccgccctggcatcttcatcaacgtccccttctacacccagtggatccacaaggtg
ttcagacactaccctgaacctcagatcaactag
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