Coregonus clupeaformis (lake whitefish): 121576614
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Entry
121576614 CDS
T08357
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04814
Motor proteins
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121576614
04820 Cytoskeleton in muscle cells
121576614
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121576614
04261 Adrenergic signaling in cardiomyocytes
121576614
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121576614
04147 Exosome [BR:
cclu04147
]
121576614
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
121576614
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of microglial cells
121576614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
ATG16
Crescentin
DUF745
PUMA_CC
ERM_helical
DUF3450
NBP1
TMF_DNA_bd
MscS_porin
Lebercilin
Exonuc_VII_L
DUF5930
SlyX
CENP-F_leu_zip
Laminin_I
DUF16
FPP
XhlA
Fez1
Motif
Other DBs
NCBI-GeneID:
121576614
NCBI-ProteinID:
XP_041745817
LinkDB
All DBs
Position
11:complement(14198512..14211769)
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AA seq
290 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEGAEGDKKAAEDKSKQLEDDLVALQKKLKGTEDELDKY
SESLKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALTKLEEAEKSA
DESERGMKVIENRASKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERSE
ERAELSEGKCSELEEELKTVTNNLKSLEAQSEKYSHKEDKYEEEMKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSISPLPAT
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgcttaagctcgacaaggagaatgccttggac
agagctgagggagccgagggagacaagaaggcagcagaggacaagagcaaacagctcgag
gatgacttggtagctctgcagaagaagctgaagggaacagaggatgagttggacaagtac
tctgagtctcttaaggatgcccaggagaaacttgagctggctgagaagaaagccaccgat
gctgaggccgatgtcgcttcccttaacagacgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtctggcaactgccctgaccaagctggaggaggctgagaagtctgct
gatgagtctgagcgaggcatgaaggtaattgagaacagagcctccaaggatgaggagaag
atggagctgcaggagatccagctgaaggaggccaagcacatcgctgaggaggctgaccgc
aaatacgaggaggttgcccgtaagctggtcatcattgagagtgatctggagcgttcagag
gagcgcgctgagctttcagaaggcaaatgctctgagcttgaagaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccagtctgagaagtattcgcataaggaggacaag
tatgaggaggagatgaaggtcctcaccgacaagttgaaggaggctgagactcgtgctgag
tttgctgagagatcagtagccaagcttgagaagaccattgatgacttggaagatgagttg
tatgcccagaaactgaagtacaaggccatcagcgaagagctggaccacgccctcaatgac
atgacttccatatcacctctaccagcaacttga
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