Coregonus clupeaformis (lake whitefish): 121576615
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Entry
121576615 CDS
T08357
Name
(RefSeq) talin-2-like isoform X1
KO
K06271
talin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121576615
09142 Cell motility
04820 Cytoskeleton in muscle cells
121576615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121576615
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121576615
Exosomal proteins of other cancer cells
121576615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Talin_IBS2B
TLN1-like_RS
VBS
I_LWEQ
Talin_middle
Talin_R4
FERM_f0
IRS
FERM_M
FERM_N
RA_2
PH_SLA1
MLKL_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
121576615
NCBI-ProteinID:
XP_041745836
LinkDB
All DBs
Position
11:complement(14251024..14406505)
Genome browser
AA seq
2549 aa
AA seq
DB search
MVALSLKICVRQCNVVKTMQFEPSTPVYDACRIIRERVPEAQTGQASDYGLFLSDDDPRK
GIWLESGRTLDYYMLRNGDVLEYKKKQRPQKIKMLDGAVKTIMVDDSKTVGELLVTICSR
IGITNYEEYSLLQEGVEEKKEDGHGTGTLKKDRTLLRDERKMEKLKAKLHTDDDLNWLDH
SRTFREQGVEESEMLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKAC
EFAGIQAQIQFGPHVEHKHKPGFLDLKEFLPKEYIKQRGSEKKIFVDHKTCGEMTEIESK
VKYAKLARSLPTYGVSFFLVKEKMKSKNKLVPRLLGITKESVMRVEEKTKDVVQEWPLTT
VKRWAASPKSFTLDFGEYQESYYSVQTTEGEQISQLIAGYIDIILKKKQSKDRFGLEGDE
ESTMLEESVSPKKSTILQQQFNRVGRVEHGSVALPGIIRSGSIGGPDNTFNMGTMPSAQQ
QITTGQMHRGHMPPLSLAQQALMGTINTSMQAVQQAHADLGEVDNLPPLGQDMASRVWVQ
NKVDESKHEIHSQVDAITAGTASVVNLTAGDPTDTDYTAVGCAITTISSNLTEMSRGVKL
LAALVEDQVGSGQNLMGAARTLTGAVSDLLRSVEPAAGEPRQMVLTAAGSIGQASGDLLR
HMGEGETDERFQDILMSLAKAVANAAAMMVLKAKNVAQVAEDTVLQNQVIAAATRCALST
SQLVACTKVVSPTISSPVCQEQLVEAGKLVDRSVESCVKACLAATDEGELLKQVGSAANT
VSQALSDLLQHVRHYASCGEPIGRYDQATDTIMTVTESIFTSMGDAGEMVRQARVLAQAT
SDLVNAMRSDAEAEVDVDNSKKLLAAAKLLADATARMVEAAKGAAAYPENEDQQQRLREA
AEGLRVATNAAAQNAIKKKLVNRLEIAAKQAAAAATQTIAAAQNAAASNKNTASHQQLVH
SCKAVANHIPQLVQGMRSNQAQPEELSAQIALIMASQSFLQPGSKMVTSAKSTVPTVTDQ
AAAMQLGQCAKNLATCLAELRTATQKAHEACGPLEIDYALNAVQTLRSELQDARMAAHDG
QLKPLPGESLEKCAQDLGSTSKAVGSSMAQLLTCAAQGNEHYTGVAARETAQALRTLAQA
ARGVAASTKEPQSAAAMLDSAQYVMEGSAMLIHEAHQALVSPGDTESQQRLAQVARAVSH
SLNNCVNCLPGQKDVDMALRSIGEASKKLLVDTLPPCSKSFQEAQSELNHTAAELNHSAG
DVVHSSRGTSSQLAMASGKFSEDFDEFLDTGIEMAGHTQCQEDQIEVIGNLKNISMASSK
LLLAAKSLSVDPGAANAKNLLAAAARAVTESINQLITLCTQQAPGQKECDNALRELEAVR
GLLDNPSEPVSELSYFDCIESVMENSKVLGESMAGISQHCKTGDVPAFGHCVGVASKALC
GLTEAAGQASYLVGVSDPNSQSGHEGLVDPIQFARANQAIQMACQNLVDPASSPSQVLSA
ATIVAKHTSALCNACRLASSKTSNPVARRHFVQSAKEVANTTANLVKTIKALDGDFSEEN
RDRCRVATTPLIEAVENLSTFASNPEFASIPAQISNEGSAAQEPIVRSARSMLDSSTLLL
ETARSLIINPKDPPTWSILAGHSRTVSDSIKSLITSIRDKAPGQRECDYSIDNINKCIRD
IEQASLAAVGQSLQGCRDDISLEALQEQLTSSVQEIGHLIDPINTAARGEAAQLGHKVTQ
LASYFEPLIVASVGLASKIVDQQQQMNILDQTKTLSESALQMLYAAKEGGGNPKAAHTHD
AIAEAIQLMKEAVDDIMVTLNEAASEGGMVGGMVEAVAEAMGRLDEGTPPEPEGSFVDYQ
TTMVKYSKAIAITTQEMMTKSVTCPEELGGLASQVTVDYSQLAHQGRLAAATAEPEEVGF
QIKTRVQELGHGCIYLVQKAGALQMSPTDSFSKRELIECARGVTEKVSMVLSALQAGNKG
TQACITAASTVSGIIADLDTTIMFASAGTLNPENEESFADHRESILKTAKALVEDTKRLV
SGAASSQDRLAQAAQSSANTITMLTDVVKLGATSMGSDDPETQVVLINAVRDVAKALAEL
IGATKCAAGKPADDPSMYQLKSAAKVMVTNVTSLLKTVKAVEDEATRGTRALEATIECIK
QELTVFQSKDLPEKSTTPEEFIRMTKGITTATSKAVAAGNSAQQEHVIATANLSRKAISD
MLTTCKQAACHPEVSDEVRSKALHYGSECTTGYIDLLEQVLLVLQKPTADQRQQLAVHSK
CVAGCVTELIQTAEAMKDGGSEWVDPEDPTVIAETELLGAAASIEAAAKKLEQLKPRAKP
KQADETLDFEEQILEAAKSIAAATSALVKSASAAQRELVAQGKVGSILANAVDDGQWSQG
LISAARMVAAATSNLCEAANASVQGHASEEKLISSAKQVAASTAQLLVACKVKAQPDSEA
MRRLQAAGNAVKRASDNLVKAAQKAAFDKADDDSVVVKTKFVGGIAQIIAAQEEMLRKER
ELEEARKKLAQIRQQQYKFLPTELREDER
NT seq
7650 nt
NT seq
+upstream
nt +downstream
nt
atggtggccctgtcactcaagatatgtgtccgccagtgcaatgtggtgaagaccatgcag
tttgagccctccactccagtgtatgacgcctgcaggatcatcagggagagggttccggaa
gcccagactggccaagcctctgattacggcctgtttctctctgatgatgatcccagaaaa
ggaatctggttggagtctgggaggactctggattactacatgctccggaacggggatgtc
ttggagtacaaaaagaaacagaggccccagaagatcaagatgctggacggggcagttaaa
actatcatggtggatgactctaaaaccgtgggagagctgcttgttaccatatgcagtaga
ataggaatcaccaactacgaggagtactccctgctccaggagggggtggaggagaagaag
gaggatggtcatgggacaggcaccctgaagaaggacaggactctgctccgagacgagagg
aagatggagaagctcaaagccaaactccacacagacgatgacttgaactggctggaccac
agccggacattcagagagcagggggtggaggagagtgagatgctgctgctcagacgcaag
ttcttctactccgaccagaatgtggactcacgagaccctgtccagctcaacctcctctat
gtacaggccagagatgacatactgaacggctcccaccctgtgtcatttgataaagcctgt
gagtttgctggaattcaggctcagatccagtttggaccccatgtcgaacacaaacacaag
cctggattcctagacctgaaggagtttctacccaaagagtacatcaagcagagagggtcg
gagaaaaaaatatttgtggatcacaaaacctgtggagaaatgacagagattgagtctaaa
gtgaagtatgcgaaactagcaaggtcccttccgacatatggggtctccttcttcctggtg
aaggaaaagatgaaaagcaagaataagctggtccctcggttactggggataaccaaagag
tcggtgatgcgggtagaagagaagactaaagacgtggttcaggagtggcccttaaccacg
gtgaagagatgggctgcttctcccaagagcttcaccctggactttggggagtaccaggag
agttactactctgttcagaccacagagggggaacagatttctcagctaattgcaggatac
atcgacatcatcctcaaaaagaagcagagtaaggatcgttttggcttggagggagatgag
gagtccaccatgctggaggaatcggtctctccaaagaagtccaccatcctacagcagcag
ttcaacagggtgggtcgtgtggagcatggttcggtagcactgccaggtatcatccgctct
gggtccatcggcggccctgacaacaccttcaacatgggcaccatgccctctgcacagcag
cagatcaccacagggcagatgcacagaggacacatgcccccactgagcttggcccagcag
gccctgatggggaccattaacaccagtatgcaggcggtgcagcaggcccatgctgatctg
ggggaggtagataacctgcctcctctgggccaggacatggcgtccagagtttgggttcag
aacaaagtggatgagtccaaacatgaaatccactctcaagtagatgccataacagccgga
acggcatctgtggttaatcttacagcaggtgaccccacagacacagactacacggcggtg
ggctgtgctatcacaaccatctcctccaacctgacagagatgtctaggggggtgaagctg
ctggcagcgctggtggaggaccaggtgggcagcgggcagaacctgatgggagctgccagg
accctgacaggggccgtctctgacctgctcaggtctgtggagcctgcggctggagagccc
agacagatggtgctcactgcagcaggaagcataggccaggccagcggggacctgctgcgt
cacatgggggagggcgagactgacgagaggttccaggacattctgatgagcctggccaaa
gcagtggccaacgcagctgccatgatggtcctcaaggccaagaacgtggcccaggtggca
gaggacacggtgctgcagaaccaagtgattgcagctgctactcggtgtgccctgtccacc
tcacagctggtggcctgcaccaaggtggtgagtcccaccatcagttccccggtgtgccag
gagcagctggttgaggcagggaagctggtggaccgctcggtggagagctgtgtcaaggcc
tgcctggcggcgacagacgaaggtgagctgctgaagcaggtgggttccgcggccaacaca
gtgagccaggcactcagtgacctgctgcagcacgtacgccactatgccagctgtggtgag
cccatcggacgctacgaccaggccacagacaccatcatgaccgtgactgagagcatcttc
acctccatgggagatgcaggggagatggtgcgtcaggccagggtgctggctcaggccacg
tcggaccttgtcaatgccatgaggtcagacgctgaggccgaggttgacgtggacaactct
aagaagctgctagccgcagctaaactcctggctgatgccacggccaggatggtagaggct
gctaagggggctgcagcgtacccagagaatgaggaccagcagcagaggctaagagaggca
gcagaggggttacgcgttgccacgaacgctgcagctcaaaacgccatcaagaagaagctg
gtcaacaggctggagattgctgctaagcaggctgcggctgctgctactcagaccatcgca
gctgcccagaatgctgctgcgtccaataagaacactgcctctcatcaacaactagtacac
agctgcaaggcagtggcaaaccacatccctcagctggtccaggggatgaggagtaaccag
gcccagccagaggagctcagtgcccagatagcgcttatcatggccagccagagcttccta
cagcctggcagtaagatggtgacgtctgcaaagtcaaccgtccccacagtgacggaccag
gctgcagcaatgcaacttggccaatgtgccaagaacctggccacctgcctagctgagtta
cggacagccacccaaaaggcccatgaagcctgtggtccattggagatagactatgccctc
aatgctgtccaaactctgaggagtgagcttcaagatgccaggatggctgcacacgatgga
cagctcaaaccacttcctggggaatcgctagagaagtgtgcccaggacctgggtagtacc
tccaaggctgttggctcctccatggctcagctgctgacctgtgctgcccagggcaatgag
cactacacaggcgtagctgccagggagacggcccaggccttgaggacattggcccaggca
gccagaggtgtggcggccagcaccaaggaaccccagtctgcggcggccatgttggattct
gcccagtacgtcatggagggatctgccatgctcatccatgaggcccaccaggccctggtc
tcccctggcgacacagagagtcagcagaggctagcacaggtggccagggcagtgtcccac
tctctgaataactgtgtcaactgcctgcctggccagaaggatgtggacatggccctaagg
agcatcggagaggccagcaagaaactgctggtggacactctccctccctgcagtaagtcc
ttccaggaggctcagagtgagctgaaccatactgcagctgagctcaaccactctgcaggg
gacgtggtccactcatcccggggtaccagcagccagctggccatggcttctgggaaattc
agcgaggactttgatgagttcctggacaccggcattgagatggccggacacactcaatgc
caagaggaccaaatcgaagtgattggcaacctgaagaacatctccatggcatccagcaag
ctccttctggcagccaagtccctgtcagtggatcctggagcagctaacgccaagaacctg
ttagctgctgcagcaagagcggtgacagagagtattaaccagctcatcacactgtgtacc
cagcaggcaccgggccagaaggagtgtgacaacgctctgagagaactggaggctgtaaga
ggattgctggacaaccccagtgagcctgtcagtgagctctcctactttgactgcatcgag
agtgtcatggagaactcaaaggttcttggagagtccatggcggggatttcccagcactgt
aagacgggcgacgtgccagcgtttgggcattgcgtgggagtggcgtccaaggccctgtgt
gggttgacggaggcggctggacaggcctcctacctggtgggtgtgtctgatccaaacagc
caatcgggtcatgaggggctggtggatcccatccagtttgcccgggccaaccaggctatt
cagatggcctgtcaaaacctggtggaccctgccagtagcccctctcaggttctgtccgca
gcaacgattgtagccaagcatacctcagctctttgcaatgcctgccgcctggcctcgtcc
aagacatccaaccctgtggccaggagacactttgttcagtctgccaaagaggttgcaaac
accacggccaaccttgtcaaaactataaaggccttggatggtgacttctcagaggagaac
agagacaggtgccgtgtcgctacaactccactcatcgaggcagtagagaatctatccaca
tttgcctccaacccagagtttgctagtatccctgcacagatcagcaatgagggctcggca
gcccaggagcccattgtacgttcagcccgctccatgctggacagctccaccctgctcctg
gagaccgcccgttcactcatcatcaaccccaaagacccacccacctggtccatcctggct
gggcactcccgcaccgtctccgactccatcaagagcctcatcacctccatcagggacaag
gcaccagggcagagggagtgtgactactccattgataacatcaacaagtgtatccgggac
attgagcaggcttctctagctgctgtgggccagagcctacagggatgtagggatgacatc
tctttagaagctttgcaagagcagttgacatcgtcggtgcaggagattggacatctcatc
gatcccatcaatactgcagccaggggtgaagctgcccagctggggcacaaggtgacccag
ctggccagctactttgagccgctgattgtggcgtctgttggcctggcctctaagatcgtg
gatcagcagcagcagatgaacatcctggaccagactaagaccctgtcagagtccgctctg
cagatgctctacgcagccaaggagggaggtggaaatcctaaggctgcccacacccacgac
gccatagcagaggctatccagctgatgaaggaggctgtggacgacattatggtgacgctg
aatgaggcggccagcgagggcggcatggtgggaggcatggtggaggctgtcgctgaggcc
atgggcaggttggatgaaggcactccccctgaaccagaaggatcctttgtggattaccag
accaccatggtgaaatactccaaagccatcgccatcacaactcaggagatgatgactaag
tcagtgacgtgtccagaggagctgggtggcctagcctctcaggtgactgtagactacagc
caattagcccaccaaggtcgcctggcagccgccaccgcagaaccagaagaggtgggcttc
cagattaagactcgggtccaggagctgggccatggatgtatctacctggttcagaaggct
ggggccctgcagatgagccccactgacagcttctccaagagggagctcattgagtgtgcc
cgtggtgtcactgagaaggtttccatggtgctgtctgcgttgcaggcaggtaacaaaggc
actcaggcctgcatcacagcagccagcactgtctctggcatcatcgctgacctggacacc
accatcatgttcgcctcggccggaacactcaatcctgagaacgaagagtccttcgctgac
cacagggagagcatcctgaagacagccaaggctctggtggaggacactaagcggctggtg
tctggggcagcgtccagtcaggacagactggcccaggctgcccagtcctcagccaacacc
atcaccatgctcactgacgtggtcaaactgggagccaccagcatgggctctgacgaccca
gagactcaggtggtcctcataaatgcggtgagagatgtggccaaggctctagctgagctc
atcggcgccaccaagtgtgctgcaggcaagccagcggatgacccgtccatgtatcagctg
aagagtgctgccaaggtgatggtgaccaatgtgacttcactgctgaagacggtcaaggct
gtggaggatgaggctactcgcgggacgagggcactggaggccaccattgagtgcatcaaa
caggagttgacagtgttccagtccaaggacctccccgagaagtcgaccacgccggaagag
tttatccgcatgacaaagggcatcaccacagcaacgtccaaggctgtggcagcgggcaac
tctgcccagcaggagcacgtcatcgccacagccaacctgagccgcaaagccatctctgat
atgctgaccacctgcaagcaagcggcctgtcatccagaggtgagtgatgaggtgaggagc
aaggccctgcactacgggtcagagtgcaccactggatacatcgacctgctggagcaagta
ctgctggtgctccagaagcccacggctgaccagaggcagcagctggcggtacactccaag
tgcgtggcgggatgtgtgacagagctcatccagacagctgaggccatgaaggatggagga
tcagaatgggtggaccccgaggaccccacagtcatcgcagagactgagctgttgggagcg
gcagcctcaatcgaagccgcagccaagaaactggagcagctgaaacccagagccaagccc
aagcaagcagatgagacgctggactttgaggagcagatcctggaggcagcaaagtccata
gctgcagccactagtgccctggtgaagtctgcttctgcagcacagagagagctggtggca
cagggcaaggtgggatccattcttgccaatgctgtggatgatggccagtggtcacagggt
ctcatatctgctgcgaggatggtggcggcagcgaccagtaacctgtgtgaggcggccaat
gcctcagtccagggacacgccagtgaagagaagctcatctcctcagccaagcaggtggca
gcctccacagctcagctcctagtggcctgcaaggtcaaagctcaaccggactccgaggcc
atgaggagactgcaggctgctgggaacgcagtcaagcgggcatcagacaacctggtgaag
gcggctcagaaagcagcctttgacaaagctgatgacgacagtgtggtggtcaagaccaag
ttcgtgggtggcattgctcagatcattgcagcccaggaggagatgctgaggaaagagaga
gagctggaggaggccaggaaaaagctggctcagatcagacagcagcagtacaagttcctg
cccactgaactgagggaggatgagagatga
DBGET
integrated database retrieval system