Coregonus clupeaformis (lake whitefish): 121576623
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Entry
121576623 CDS
T08357
Name
(RefSeq) putative nuclease HARBI1 isoform X1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121576623
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Gene silencing
Transposable elements
121576623
BRITE hierarchy
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GFIT
Motif
Pfam:
DDE_Tnp_4
DDE_Tnp_1
Plant_tran
HTH_Tnp_4
Motif
Other DBs
NCBI-GeneID:
121576623
NCBI-ProteinID:
XP_045079545
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Position
11:complement(15745101..15746481)
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AA seq
358 aa
AA seq
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MFVVDLLRDAITSPTRRHNAITPEKKVITTLRYLATGKMQQCSSDDLGLSQSSVSRVITQ
TLTALSQPNIVTQFVSFPLDARTLHTHKRAFMDIAGFPGVVGVIDGTHVRIIAPSEDEAV
FVNRKNFHSINVQIVFNAAWKILDIVAKWPGSTHDARMLSESGIRQLFERRYVPANCHLL
GDSGYPCKPWLLTPYLQPRQGPQLNYNRAHKTTRAVVERGIGQLKRRFHVLHGEVRLRPE
KVSKLIIACAILHNICKVRQIAEPLEDGDEDEDGDNDEDGGEEDIHIPQGNLAQSGLPYR
ANFTNLHFRQAVAPCHLRTCDGIKNYHSFTAHHLQLLNARHRTQSLNGLFFRCSILRR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggtggatctccttagagatgcaattacttcaccaactcgacgccacaacgct
attacaccggagaagaaagtaatcacaaccctgaggtatttggcaacagggaaaatgcaa
caatgcagcagtgatgacttgggtctgtcccaatcctccgtcagcagagtcatcacccaa
acactgacagctttgtcacaacctaatattgtgacacaatttgtttcattcccgctggat
gcccgcactttacacacacataaaagggcatttatggacattgcaggattccctggcgtt
gtgggtgtaattgatggaacacatgtgagaataattgcgccatcagaggacgaggctgtc
tttgttaacaggaagaatttccacagcatcaatgtgcaaatagtgttcaatgcggcctgg
aagattttggacattgtggctaaatggccaggctccacacatgatgcgagaatgctctcc
gagagtggcatcagacagctttttgagagacgctatgtgccagctaattgccacttgtta
ggggacagtggctacccatgcaaaccatggctccttacaccttacctccagccacgccaa
gggccccaactaaactataacagggcccacaagacaacaagagcggtggtggagcgtggc
ataggccagcttaagaggcgctttcatgttctccacggagaggtgcggctgaggcctgaa
aaagtcagcaaactcatcatagcctgtgcaatattacacaatatttgcaaggttagacag
attgcagaacctctggaggatggcgatgaggatgaggatggagacaacgatgaggatggt
ggtgaagaagatattcacattccacaggggaacctagcccagagtggactgccttacagg
gcaaacttcacaaatttacatttcaggcaagctgtagccccatgtcatttgagaacttgt
gatggtattaagaactaccacagttttactgcacatcacctgcaactgttaaatgcaaga
cacagaacacaatctctaaatggtttattttttaggtgttcaattttaaggcggtag
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