Coregonus clupeaformis (lake whitefish): 121576624
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Entry
121576624 CDS
T08357
Name
(RefSeq) COUP transcription factor 2 isoform X1
KO
K08548
COUP transcription factor 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121576624
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121576624
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
121576624
Nuclear receptors [BR:
cclu03310
]
2. Hepatocyte nuclear factor 4 like
2F. COUP-TF like receptor
121576624
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
121576624
NCBI-ProteinID:
XP_041745851
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Position
11:16100767..16108235
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AA seq
421 aa
AA seq
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MAMVVWRGSQDDVSETQGTLSSQSQGGLSLPTTQMNLSGSQVAPPTPQTPVQGPPNNTVQ
STPTNQTMQSEKQQPQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANR
NCPIDQHHRNQCQYCRLKKCLKVGMRREVSLFTAAVQRGRMPPTQPHHGQFALTNGDPLH
CHSYLSGYISLLLRAEPYPTSRYGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFF
PDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIR
IFQEQVEKLKVLHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQY
PNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPYMSI
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggtagtgtggagaggctcccaggacgatgtgtctgagacccaaggtaccctt
tcttcgcaatctcaaggaggactatcccttccgaccactcagatgaatctgtcaggctct
caggtcgcccctccgacccctcagacacccgtccaaggacccccgaacaacactgtacag
tctacgccgacaaaccagacgatgcagtcggagaaacagcagccacagcacatagaatgc
gttgtttgcggggataaatcgagtggtaaacactatggccagtttacttgcgaggggtgc
aaaagcttcttcaaacggagcgtacgaaggaacctcagttatacatgccgtgccaacagg
aattgtcccattgaccagcaccatcgcaatcagtgtcagtactgccgcctcaaaaaatgc
ctgaaagttggcatgagacgggaagtttctctttttactgcagcggtgcaacggggacgg
atgccacccacacagccacaccatggtcagttcgccttgacaaatggggacccactgcac
tgccattcctacttatccggatatatatctctactgctaagagcggagccctacccaacg
tcccggtatggcagtcaatgcatgcaacccaacaacatcatgggcatcgagaacatatgt
gaactggcggccaggatgctgttcagtgccgtggagtgggctaggaatatccccttcttt
ccagaccttcagattactgaccaggtggctctgttgaggttgacctggagtgagttattt
gtgctcaacgccgcacagtgctccatgcctctccatgtggctccacttctggcggcggct
ggcctacacgcctccccaatgtctgcggacagagtggttgcctttatggaccacattagg
atcttccaagaacaagtggaaaagctgaaagttttgcacgttgactctgctgaatacagc
tgcttgaaggcaattgtgctcttcacatcagacgcttgtggcctctcagatgtggcccat
gtggaaagtttgcaagagaagtcccagtgcgccctggaggaatatgttcggagccagtat
cccaaccagccaacacgatttgggaagttgttacttcgcttgccttcactgcgcacagtg
tcttcatccgtcatagagcaattgtttttcgtccgattggtaggtaaaaccccaattgaa
accctcatcagggatatgttgctttcggggagcagttttaactggccttacatgtcaatt
cagtaa
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