Coregonus clupeaformis (lake whitefish): 121576626
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Entry
121576626 CDS
T08357
Name
(RefSeq) myocyte-specific enhancer factor 2A isoform X1
KO
K09260
MADS-box transcription enhancer factor 2A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121576626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121576626
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
121576626
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
121576626
NCBI-ProteinID:
XP_041745857
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Position
11:complement(16510998..16631626)
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AA seq
478 aa
AA seq
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MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVEKLRNKGHNDLCASPDPDDCFGHSPLMDDRFGKLS
EESDLMYKRCGPTALPQQNFPMHVAVPVSNQNTMSYHPGGSMSSQALAQAAASLSDSGML
PPPQSSLHRNVGSSGGQQRPPTQGNAGSSFVNSRGSPGLLGTPSGNGLGKVMPTKSPPPP
GVNMGMGNRKPDLRVVIPPSSKGMMPPLSEEEEMDLNTQRLSSSQSQPLATPVVSVTTPS
LPPQGLVYSGMPTAYNTEYSLSSAEISSLQGFGSPGLSLGSMSAWQQHQLGQAALSSLVG
GGHLPQGSNLSINTSQNINIKSEPISPPRERVTPSGFHQQQQQQRHQQQQQASSRQDLGS
SPVDSLSSSCSSYDGSDREDHRPDFHSSSMGLSRPPAGTEDNRASPSVKRMRMDTWVT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgggacggaagaagatacagatcacgaggatcatggatgagaggaacaggcaggttact
ttcacgaagaggaagtttgggctaatgaagaaggcctatgagctcagcgttctatgtgac
tgtgagatagccctgatcatattcaacagctcaaacaaactctttcagtatgcgagcact
gatatggacaaagtcctgctcaaatacactgagtacaatgagccccacgagagcagaacc
aactccgacattgtcgagaaattaagaaacaaaggccataatgacctgtgtgccagtcct
gatccagatgactgttttgggcacagccccctcatggacgaccgtttcggcaaactaagc
gaagagagtgatttaatgtacaagcgctgtggtcccacagcgctgccccagcagaacttc
cccatgcatgtggcagttccggtctccaaccagaacaccatgtcctaccacccaggagga
tccatgagcagccaggccctggcccaggccgcagcctctctgagtgacagcgggatgctc
cccccccctcagtcctccttacacagaaacgtgggctccagcgggggccagcagaggccc
cccactcaaggcaatgcggggagcagctttgtcaactccaggggctctccgggactcctg
ggcacacccagcgggaacggcctggggaaagtcatgcccaccaagtctccaccgccccct
ggagtgaacatggggatgggaaaccgcaagccagacctgagagtggtgatccccccatcc
agcaaaggcatgatgcccccactgtcagaggaagaggaaatggatttgaacacccaaagg
ctaagcagctcccagtcccagccactggccaccccagtagtgtctgtcaccacccccagc
ctgcccccccaaggcctggtctactcaggcatgcccaccgcttacaacaccgagtactcc
ctgagcagtgcagagatctcctccctacagggctttggctctccagggctctctctgggc
tccatgtcggcatggcaacaacatcaactgggtcaggcagctctcagctctttggtgggt
ggtggtcacctacctcagggctccaacctctctatcaacaccagccaaaacatcaatatc
aagtcagagccaatctcccctccgcgggagcgcgtcaccccctctggcttccaccagcag
cagcaacagcagcggcatcagcaacagcagcaggcgtccagccggcaggacctgggaagc
tcgccagtggacagcctcagctcctcctgcagctcgtacgacggcagcgaccgtgaggac
caccggccagacttccactcctcctccatggggctgagcagacccccagccggcaccgag
gacaacagggcgagcccttctgtcaagcgcatgcgcatggacacctgggtgacatag
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