Coregonus clupeaformis (lake whitefish): 121576659
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Entry
121576659 CDS
T08357
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121576659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121576659
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121576659
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
121576659
NCBI-ProteinID:
XP_041745923
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Position
29:54743912..54777876
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AA seq
820 aa
AA seq
DB search
MDVEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSDAGTPGRSALDS
VEVAYGRQIYVFNEKIVNGHVQPNLGDLCASVADSLDDKNVTDMWLMVKQMTDVLLVPAK
DTLKSRTAVDMQMAFVTQALQFLENSYKNYTMVTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEVEGHPVWALIYYCLRCGDLGAAMQVVNRAQHQLGDFKTWFQEYMNSP
DRRLAPATENKLRLHYRRVLRNSADPYKRAVYCHIGKCDIADNHGEVADKTEDYLWLKLN
QVCFDDDGSSAPQDRLTLAQLQKQLLEDYGESHFSAIQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHAVHVALVLYELRLLLKSSGQSAQLLSQEAGDPPMVRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKNSQGENMFMCCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTQAIITKVALEAENKGLFEEAVKLYELAKNPDKVLELMNRLLSPLIAQVGSTQSN
KERLKNTAVAIAERYRTQGVAGEKSVDSTFYLLLDLMTFFDEYHVGHIDQAYDVMERLKL
VPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNILFMQYKRLKGAAAGTPGRPQRSME
DRDSQLRSQARALITFAGIIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagggctttggagagctcctgcagcaggcggagcagcttgcagcggagact
gaggccgtgtctgagcttccccatgttgagaggaaccttcaggagatccagcaggctgga
gagaggctacgttcccgcaccctaacccgaacatcacaagacgctgccgacgtaaaagcc
tccatcctcctggggtccagaggcctggacatcttccacatctcccagcgtctggagagc
ctgagtgctgccactacctttgaacctctggagccagtgaaggacactgacatccagggc
tttctgaagaatgagagggacaatgcgctgctctctgccattgaggagtcacgtcgcaga
acgttcctcctggcagaggagtaccaccgtgagtccatgctggttcagtgggagcaggtg
aagcagagagtactgcacaccttgctgggagcaggggaggatgctctggacttcagccaa
gacgtagagcccagctttgtgagtgacgcagggactcctgggcggagtgctcttgacagc
gtcgaggtagcctatggacgacagatctacgtcttcaatgagaagatagtgaacggacat
gtccagcccaacctgggagacctctgtgcctcagtggcagacagcctagatgacaagaac
gtgacagacatgtggctgatggtgaagcagatgacagacgtgctgctggtcccagccaaa
gacacgctgaagagccgcacggccgtggacatgcagatggctttcgtcacgcaggccctg
cagttcctggagaacagctacaagaactacaccatggtgacggtgtttgggaacttgcac
caggcccagctgggcggagtccctggcacctatcagctggtccgcagcttcctcaacatc
aaactgccagggcctctgccaggcatgcaggatggtgaagtggagggtcacccagtctgg
gctctgatctattactgcctgcgctgtggggacctgggggcagccatgcaggtggtgaac
cgggctcagcaccagctgggagacttcaagacctggttccaggaatatatgaacagccct
gacagacgcttggcccctgccacagagaacaagctgcgtctccactaccgcagagtgctg
aggaacagcgctgacccctacaagagggccgtctactgccacatcgggaagtgtgacatc
gcagacaaccatggagaggtggccgacaagaccgaggactacctgtggctcaagctcaac
caggtgtgcttcgatgacgacggcagcagtgcacctcaggacagactgacactggcccag
ctacagaaacagcttctagaggactatggagagtctcacttctcagccatccagcagccg
ttcctgtacttccaggtgctgttcctaacggcccagtttgaggctgctgtggccttcctg
ttccgggtagagcgtctacgcagtcatgctgttcacgtggctctggttctctacgagtta
cggctgctgctcaagtcatcaggacagagcgcacaactgttgagtcaggaggctggggac
ccccctatggtgcgacggctcaacttcatccgtctcctcatgctctacacacgcaagttt
gagtccacagacccccgggaggctctacagtacttctacttcctacggaatgaaaaaaac
agccaaggagagaacatgttcatgtgctgtgttagcgagttggtgattgagagtcgagag
tttgacatgcttctaggaagactggaaaaagatggcagcagaaagcctggagtgattgat
aaatttgccggagacacgcaagccattatcacaaaagtggcgctggaggcagagaataag
ggcctgtttgaggaagcagtcaaactgtatgagctggccaagaatccagacaaagtccta
gagctgatgaacaggctgctgagtcctcttattgcccaagtgggctccacccagtccaat
aaggagagactgaagaacactgctgttgccatcgctgagcggtaccggacccagggtgtt
gctggagagaagtctgtggacagcaccttctacctgctgctggacctcatgaccttcttt
gatgagtaccatgttggtcacatagatcaggcctatgatgtgatggagagactgaagctg
gtccctctgagtcaggacagtgtggaggagagggttgctgcattccgtaatttcagtgat
gaggtcaggcataatttgtcggaggtgctcctggccaccatgaacatcctgttcatgcag
tacaagcgtctgaagggcgccgcagcaggaacccctggtcgcccacagagatccatggag
gacagagactcgcaactgcgcagccaggctcgagcactgatcacgtttgctgggattatc
ccataccgcatggcaggcgacaccaatgcccggctggtgcagatggaggtcctaatgaac
tga
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