Coregonus clupeaformis (lake whitefish): 121576662
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Entry
121576662 CDS
T08357
Name
(RefSeq) RING finger and SPRY domain-containing protein 1
KO
K23332
RING finger and SPRY domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121576662
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121576662
BRITE hierarchy
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GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
Prok-RING_4
RING_XB3-XBAT31
DUF3077
Motif
Other DBs
NCBI-GeneID:
121576662
NCBI-ProteinID:
XP_041745932
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Position
29:54962574..54977409
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AA seq
580 aa
AA seq
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MIVASWIAFCASRSLAQVLLLSLEQLHSVRVWESLGTTRTMGNSCVCREDSDVEDGSANR
GQLRRVDHTAADPPEARSSRPRDPVRPPRRGRGPHEPRRKKQNVDGLVLDTLAVIRTLVD
NDQEPPYSMITLHEMAETDDGWLEVVQSLIRVIPLDDPLGPAVITLLLDECPLPTKDALQ
KLSGMLSLSSTVARQDAVIPSKHRNTTAVLGCLAEKLAGPASIGLLSPGTLEYLLESLSS
EAHPTVMLFALIALEKFSQTSENKLTVSESCISDRLGILESWADHTDYLKRQVGFCSQWS
LDNLFLKDGRQFTYEKVNLSNINAMLNSNDVSEYLKISPSGLEARCDASSFESVRCTFCV
DSGVWYYEVTVVTSGVMQIGWATKDSKFLNHEGYGIGDDEYSCAYDGCRQLIWYNARSKP
HSHRCWKEGDAIGFLLDLGKKQMLFYLNGHPLPPEKQVFSSATSGFFAAASFMSYQQCEF
NFGAKPFRHPPSVKFSTFNDFASLASDEKIILPRHRRLALLKQVSIRDNCCTLCCDQMAD
TELRPCGHSGMCMECALQLETCPLCRQDIQTRVRLISHVS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgatagtagcttcctggattgcattctgtgccagcaggagccttgcacaggttctactg
ctctctttggagcagctacattcagtacgggtttgggaaagcctcgggacaaccagaacc
atgggaaacagctgtgtttgtagagaagacagtgatgtggaggatggatcggcaaatcgc
ggtcagctcaggcgagttgatcacaccgctgctgatcccccggaggcacgaagcagtcgg
ccccgggaccctgtcagaccgccccgccgtggccggggaccccatgaaccccgccggaag
aaacaaaatgtggacgggctggtgctggacacacttgctgtgatcaggactctagttgac
aatgaccaagagcccccctactccatgatcacgctgcatgagatggcagaaacggatgat
ggctggttggaggtggtccagtctctgattcgggtgataccactggacgacccgttggga
ccagctgtgatcaccctgctgcttgacgagtgcccactgcccacaaaagacgctctacag
aagctgtccgggatgctgagcctgagttccactgtggcccgccaggatgccgtcatccct
tctaagcaccgcaacactacagctgtactgggctgcctggctgagaaactggctggtcca
gcgagcattggactcctgagccctggaaccctggagtacctgctggagagcctgagttct
gaggcccatcctactgttatgctctttgccctcatagccttggagaagttctcacagacc
agtgagaacaagctaacggtgtcagagtcgtgtataagtgaccggctggggattctggaa
tcgtgggctgaccacacagactacctgaagcgccaggtcggcttctgttcccaatggagc
ctggataacctcttcctgaaagatggtcgtcagttcacctatgagaaggtgaacctgagc
aacatcaatgccatgctgaacagcaacgacgtcagcgagtatcttaagatctctcccagt
ggactcgaggcgcgctgcgatgcgtcctccttcgagagtgtccgctgtaccttctgtgtg
gactcaggcgtgtggtactatgaggtcactgtggtcacctcaggggtcatgcagattggc
tgggccaccaaggatagcaagttcctcaaccatgagggctatgggataggagatgatgaa
tactcgtgtgcatatgatggctgcaggcagctaatctggtacaacgctcgcagtaagcca
cactcccaccgctgctggaaagagggagatgccattggtttcctactggacctcggtaag
aagcagatgcttttctacctgaatggacatccgctccccccagagaagcaggtgttctcc
tcagcaacgtctggcttctttgcagcagcaagtttcatgtcctaccaacaatgtgagttt
aactttggggcgaagcctttccgccaccccccgtctgttaagttcagcaccttcaatgac
tttgcctcgctggcgtctgatgagaagattatccttcccagacaccggcgcctggccctg
ctcaagcaggtgagcatcagagacaactgctgcaccctctgctgtgaccagatggccgat
acggagctgagaccctgcggacacagtgggatgtgtatggagtgtgccttacagttggag
acgtgcccgctgtgtcgccaggacattcagacacgtgtcagactcatctcacacgtgtcc
tga
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