Coregonus clupeaformis (lake whitefish): 121576689
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Entry
121576689 CDS
T08357
Name
(RefSeq) ran GTPase-activating protein 1 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121576689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121576689
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121576689
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Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
121576689
NCBI-ProteinID:
XP_041745982
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All DBs
Position
1:complement(73745475..73761895)
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AA seq
561 aa
AA seq
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MTTTDTMASDDIALLAEALSKTHVGDGELSYKGQGLKLDNAESVKELVREIEEYQGLRAL
RLEGNTVGVEAAQAIAKSLECKDQLQSCHWSDMFTGRLRSEIPTALRSLGSALMTAGARL
RELDLSDNAFGPDGVKGIETLLKSSACHSLRELRLNNCGMGIGGGKILAAALTECHEQSS
ALGAPLKLKVFIAGRNRLENEGATALALAFQLMGSLEEVHMPQNGINHAGVTALATAMQH
NPQLRVLNLNDNTFTKRGALAMAQALRHLRTVQVINFGDCLVRSEGAIALSAVLREGLPT
LKELNVSFGEITEAAALVLAQAVQDKPHMEKLDLNGNCLGEEGCEALKETMDNMDRADIL
ASLSDDEGEPDEEEENGREMKENGMKDERDNSVKPEPTCHPEVLSFLSSPTAETLLKLGD
NRTGLIQQHVDVSDSDKAADAFLKISSLYCDDHEIKKAVLETINALLKKAFSGSSLQTYS
FLSTLLVMLGLLKGEGKVKKVQVLPGHLLVLEHAVQQDYFPQDHASLLDTFVARHGKALK
SCSSARDSLKSTLKRRISPEC
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacagataccatggcttccgatgacattgccctgctggccgaggcgctgtcc
aagactcatgtaggagatggagagctgagctacaagggccagggactgaagctagacaac
gcagaatctgtgaaggagttggtgcgggaaatagaggagtaccagggactccgggccctg
cggttggagggaaacacagtgggtgtggaggcagcacaggctatcgccaaatccttggag
tgcaaagaccaacttcagagttgccactggagtgatatgttcacgggtcgcctgcgctca
gaaatcccaaccgccctgaggtccctgggcagtgcattgatgacagcaggggccagactg
agagagcttgacctgagtgataacgcctttgggccagatggcgtaaagggcattgagact
ctactgaagagctctgcgtgtcactctctacgggagctgagactcaacaactgtggcatg
ggcatcggcgggggcaagatcctggcggcagcgttgactgagtgtcatgaacagtccagc
gctctcggtgccccactgaaactgaaagtgttcatcgcaggcagaaaccgcttggagaac
gaaggagccacagcccttgccctggcatttcagctgatgggaagcctagaggaggtgcac
atgccccaaaatgggatcaaccatgctggggtgacagctctggccaccgccatgcagcac
aacccccagctccgcgtcctcaacctcaacgacaacaccttcaccaagagaggggcgctg
gctatggctcaggctctgagacacctgaggactgtgcaggtgatcaactttggggactgc
ctggtgcgttctgaaggggccatcgctctctctgctgtcctgagagagggactgcccact
cttaaggagctgaatgtgtcctttggggagatcacagaggctgcagcactggtgttggct
caggctgtacaagataaaccccatatggaaaaactggatctcaatggtaactgtctgggg
gaggaggggtgtgaggctctgaaagagaccatggataacatggacagggcagacatactg
gcatctctcagtgatgatgagggagagcctgatgaggaagaggagaatggcagagagatg
aaggagaatggaatgaaggatgaaagagacaactcagtgaagcctgagccaacctgtcat
ccagaggtcctctctttcctcagctcacccaccgctgagacactgctcaaactgggggac
aacaggactgggctcatccagcaacatgtggatgtttctgactctgataaggctgccgac
gccttcctgaaaatctcctctctgtactgtgatgaccatgagatcaagaaggctgtcctg
gagactattaacgccctgttgaagaaggccttctctggttcctccctgcagacctacagc
ttcctgtccactctactggtgatgctgggactcctcaagggtgagggcaaggtgaagaag
gtgcaggtgttacctggtcacctgttggttttggagcacgctgtccaacaggactacttc
ccccaggaccacgcctccctgctggacacctttgttgccaggcacggtaaagccctgaag
tcctgcagcagtgcccgagatagtctcaagtccacactgaagagaaggatctccccggaa
tgctga
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