Coregonus clupeaformis (lake whitefish): 121576701
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Entry
121576701 CDS
T08357
Name
(RefSeq) P3 protein-like
KO
K14343
solute carrier family 10 (sodium/bile acid cotransporter), member 3/5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121576701
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC10: Sodium bile salt cotransporter
121576701
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Gene cluster
GFIT
Motif
Pfam:
NTCP5_P3_N
SBF
Motif
Other DBs
NCBI-GeneID:
121576701
NCBI-ProteinID:
XP_041746004
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Position
29:complement(58038828..58041219)
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AA seq
469 aa
AA seq
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MRTLFAFCCLFLITRGADQPTEGRSLTDNNNNNNTNVTADSNRRYIQIGDGTSQEFEFPE
NTKGVIVISSQYRSAASTKGRESWKQTVKVSSLDSEVLSILNVSDSHAGPVKSFIINIRS
GLPGLAQLLIQLLELDQDSFPVVIEERTDYSIRVAPSSDDPAAQLIQSGVLSHFSENPVL
FALLPLIFINKCAFGCKVEVEVLRGLLRKPVPLLLGVAGQFLVMPLYAYGLSRLGSLPKA
LSLGLVITCSAPGGGGGYLYSLLLGGDVTLAISMTLVSTVVAAAAMPLSSALYGRLLGVH
AALHVPFIKILGTLLFIAIPISLGMLVKLRLPKLTRVLLALIRPFSFVLIVGGIFMAYQM
GASILANVRPQMVVAGVTVPLFGLLLGFGMGKLAGLAVPQRKTVSIEVGVQNSLLALAVM
QLSFRRAEADFASQAPFIVALSSTSEMLLIVLGHFAHRKFCTPTTRTET
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgctatttgcattctgttgtctcttcttgataacgagaggagcagaccagccg
acggagggcaggtccctgacagacaacaacaacaacaacaacacgaacgtgacggccgac
agcaacagaaggtatatacaaatcggggacgggacctcccaggaatttgagtttcccgaa
aacactaagggcgtgattgtaatctccagtcaataccgaagcgccgcaagtacgaagggc
cgcgagagctggaagcagacggtcaaggtaagctccttggactcggaggttctttccatc
ctgaatgtaagcgacagtcatgcggggcctgtgaagagtttcattatcaacataaggtct
gggttgccgggtctggcacaactgctcatccagctattggagttggaccaggattctttc
ccggtcgtaattgaagaaaggacagactactccatcagggtggcgcctagcagtgatgac
ccagctgcccagctcatacagtcgggcgtgctgtcccacttctctgagaaccctgtccta
tttgccttgctgccgctcatcttcatcaacaagtgtgccttcgggtgcaaggttgaggta
gaggtgctgaggggtctcctgcggaagcctgtgcccctcctcttgggggtcgcagggcag
ttcctggtcatgccactgtacgcctatggcctgtccaggctgggctccctgcccaaggcc
ctctccctgggcctggtcatcacatgctctgccccgggcggcggcggaggttacctctac
agcctgctactgggcggggacgtcaccctggccatctccatgaccctggtgtccacagtg
gtagctgcagcagccatgcccctgtcctctgccctgtacggcaggctactgggggtccac
gctgccctccacgtgccctttatcaagatcctgggcacccttctcttcattgccatcccc
atctccctgggcatgctggtgaaactacgtctgcccaaactgacccgcgtgctgctggca
ctgatccggcccttcagctttgtgctcattgtgggcggcatcttcatggcctaccagatg
ggggcgtctatcctggccaacgtgagacctcagatggtggtcgcgggggtaaccgtgccc
ctgtttgggctgctgctgggctttgggatggggaagctggcaggactggcagtgccacag
aggaagactgtcagtattgaggtgggggtgcagaacagccttctggcactggcggttatg
cagctgtcgttccgacgggcggaggctgactttgcatcccaggcgcccttcatagtggcg
ctcagcagcacctctgagatgctcctcatcgtcctcggtcacttcgcccatcgaaagttc
tgtacccccaccacccggactgaaacctga
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