Coregonus clupeaformis (lake whitefish): 121576707
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Entry
121576707 CDS
T08357
Symbol
sntb2
Name
(RefSeq) beta-2-syntrophin
KO
K24064
beta-syntrophin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121576707 (sntb2)
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
121576707
NCBI-ProteinID:
XP_041746011
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Position
29:complement(58081915..58090516)
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AA seq
587 aa
AA seq
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MAVWTRADKNGQLDLLLRDRWIRVAAELTRETFTLTAEAEINAHGNNLDYNNSAGLRNGM
SNGNDPGLASGNSNRGQNSNPEQHPNHGALGRSVSPARGGINRGHYDGFNSPSSGKYNRD
NGTNSDFGSPGSSYGSPGSSFSSRHGETSINLESGASEAVRKVRVVKQESGGLGISIKGG
RENRMPILISKIFPGLAADQSRALRVGDAILSVNGNDLREATHDLAVQALKKAGKEVTLE
VKYIREVSPLFKKPSLVADLPWDGVRPQSPNFSGSEDSGSPKHSGAKDRKIILLKMCFIS
RNLTMPDLENRLMELHSPDGQHTVVMRCKDGPSAHSWFTAIHTNIAALLPQTLVHINSYL
GSSTTGSHPQLKHISWLAEQVQLDGGRHQFRPIVMALTEKDILLFESVPWNREAWSTPLL
THPLLATRLVHSGSARSSPAQGADLVFATRTGTGRGIESHVFRVETHWDLSSWTRALVQG
AHAAAELIKEVSIGCMLNRQDVRLILHYEKGFTVTREPGESAGGAVLYRYPFEKLKMSAD
DGIRNLYLDFGGPEGEMVFDLHSGPKPMVFVLHSFLSAKLTRLGLLT
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctggacacgagcggacaaaaatggtcaattagaccttttgctccgggaccgc
tggattcgggtagccgccgaattgacccgcgagactttcacattaacggccgaagcagag
ataaacgcgcacgggaacaacttggattacaacaattcagcgggcctgcgaaatggaatg
tcgaacggaaacgatccggggttagcgtcgggaaattcgaaccgtggtcaaaactcgaac
ccagagcaacatccgaaccatggtgcgctaggacgaagcgttagcccagcgcgcgggggc
atcaatcggggtcactacgacggttttaatagccccagctctggcaagtataatcgcgat
aacggtacgaactctgattttggcagcccggggtccagttacggtagtcctggatctagc
ttcagttccaggcatggcgaaacttccatcaatttagaatccggcgcatcggaagctgtg
cgtaaagttagagttgtaaaacaagagtcgggcgggttggggatcagtatcaaggggggt
cgggaaaaccgaatgcccatcctcatatccaagatcttccccggacttgcagctgatcag
agtcgggctcttcgggtcggcgacgcgatcctgtcagtcaatggaaatgaccttagggag
gctacgcatgatctagcggtccaggctctaaaaaaggccgggaaagaggttacgcttgaa
gtgaaatatatcagagaggtttccccactgtttaagaagccttccttggtggcagacctg
ccgtgggatggggtgcgtcctcagtcccccaacttcagtggcagtgaggactctgggtcc
cccaaacacagcggggccaaggaccggaagatcatcctcctcaaaatgtgctttatcagc
aggaacctgaccatgcctgacctggagaacaggctcatggagctgcactctcctgatggc
cagcacacggtggtgatgcgctgtaaggacggccccagcgcccactcctggttcacagcc
atccacactaacattgctgccctgctgccccagaccctggtccacattaactcctacctg
ggctccagcaccaccgggtcacacccccaactcaaacacatcagctggctggcagaacag
gtccagctggatggtgggcggcaccagttccgaccaatcgtcatggcactgacagagaaa
gatatcctgctgtttgaatcagtgccatggaaccgcgaagcctggtccacacccctgctc
acacacccactactcgccacaagactggtgcactctggcagtgcccgcagttccccggcg
cagggggcagacctggtgtttgccactcggacgggtacagggcggggcatcgagtcccat
gtgttccgggtagagacacactgggacctgtcctcgtggacccgggcactggtgcagggg
gcgcatgctgccgcagaactcattaaggaggtctccattggttgcatgctgaacaggcag
gacgttcgcctcatactgcactatgagaagggcttcactgtgacccgggagccaggggag
tctgcagggggtgctgtgctctacagataccccttcgagaagctcaagatgtctgcagac
gacgggatccgcaacctctacctggactttggaggtccagagggcgaaatggtgtttgac
ctgcactctggccccaagcccatggtgtttgttcttcattccttcctgtctgccaaactg
actcgtctgggcctgctgacgtga
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