KEGG   Coregonus clupeaformis (lake whitefish): 121576744
Entry
121576744         CDS       T08357                                 
Name
(RefSeq) DET1 homolog isoform X1
  KO
K10571  de-etiolated-1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121576744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121576744
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     121576744
SSDB
Motif
Pfam: Det1
Other DBs
NCBI-GeneID: 121576744
NCBI-ProteinID: XP_041746076
LinkDB
Position
29:59314990..59320385
AA seq 551 aa
MEDDSPTLKPRRIQNQNVVHRLERRRICSGRAGAHWYRVRCFHQNLFPNFTVVNVEKPPC
FLRKFSPDGRCFIAFSSDQTSLEIYEYQGCQAAEDLLLGQDGETLANGNDQRSLNIRGRL
FERFFSLLHVTNVASNGEHLNRECSLFTDDCRYVIVGSAVYVPEEPSPHFFEVYRNNESV
TPNPRSPLEDYSLHIIDLHTGRLCDTRSFKCDKIILSHNQGLYLYRNILAVLSVQQQTIH
VFQVTSEGTFLDVRTIGRFCYEDDLLTLSAVYTEARAEGQPGFSRLYKEKTINSLKHRLL
VYLWRRAEQDGSATAKRRFFQFFDQLRQLRMWKMQLLDEHHLFIKYTSEDVVTLRVTDPS
QPSFFVVYNMVSTEVMAVFENTSDKLLELFENFCDLFRNATLHSEAVQFPCSASSNNFAR
QVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERP
KTCGDHPIRFYARDSGLLKFKIQAGLLGRPINHAVRRLVAFTFHPFEPFAISVQRTNAEY
VVNFHMRHVCV
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggaagatgattccccaaccctgaaacccaggcgcatccagaaccagaatgtggtccat
cgactggagcggcgacggatctgctctgggcgggctggagcccactggtatcgcgtgcgc
tgcttccaccagaacctattccccaacttcactgtggtcaacgtagagaagcctccctgc
ttcctccgcaagttctccccagatggacgctgcttcatagccttctcctctgaccagacc
tccctggagatctatgagtaccagggctgccaggcggctgaggatctgctgctggggcag
gatggggagaccctggcaaatggcaacgaccagcgctccctcaacatccgcggccgcctc
tttgagcgcttcttttcactactgcacgtcactaatgtggcctccaatggggagcacctg
aaccgagagtgcagcctgttcactgatgactgtcgctatgtgatcgtgggctcagcggtc
tatgtgccagaggagccctctccacacttctttgaggtgtaccgcaacaacgagtctgtg
actcccaacccacgctctcctctggaggactactcactgcacatcattgacctgcacact
ggccggctttgtgacaccaggtccttcaagtgtgacaagatcatcctctcgcacaaccag
ggactctacctctaccgtaacatactggctgttctttctgttcagcagcagacaatccat
gtctttcaggtgacatcagaggggacgttcctggacgtgcggaccatcggtcggttctgc
tacgaggacgacctcctgactctgtctgcggtgtacactgaggcccgggccgagggccag
ccaggcttctcccgcctctacaaggagaagaccatcaactccctgaagcacagactactg
gtctacctgtggagacgggctgagcaggacggcagcgccaccgccaagcgacgcttcttc
cagttctttgaccagctgagacagctgaggatgtggaagatgcagctgctggatgagcac
cacctcttcatcaaatacaccagcgaggacgtggtcaccctgcgagtcactgacccctct
cagccctcattctttgtagtgtacaacatggtgagcacagaggtgatggcagtctttgag
aacacctctgacaaactgctggagctgtttgagaacttctgtgacctgttccggaacgcc
acgctccacagtgaagctgttcagttcccctgctcagcctccagcaacaactttgcacgg
caggtccagagaaggttcaaagacaccatagtgaatgcaaagtatggcggtcacactgag
gctgtgaggaggctgctgggacagctgcccattagtgctcagtcctacagcagcagcccc
tacctcgatctttctctcttcagctatgacgacaagtgggtttctgtgatggaacggccc
aaaacatgtggagaccaccccatcaggttttatgctcgggactctggcttgctgaagttc
aagatccaggcaggcctgctgggccggcccattaaccatgccgtccggcggctggtggcg
ttcacattccacccctttgagccgttcgccatctcagtacagaggaccaacgctgagtat
gtggtgaatttccacatgcgtcacgtctgtgtatga

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