Coregonus clupeaformis (lake whitefish): 121576766
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Entry
121576766 CDS
T08357
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121576766
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
121576766
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
CarboxypepD_reg
I-set
Ig_2
CarbopepD_reg_2
TSP1_CFP_C
TSP1_spondin
ig
TTR_TEN1-4
Motif
Other DBs
NCBI-GeneID:
121576766
NCBI-ProteinID:
XP_041746137
LinkDB
All DBs
Position
11:complement(31081064..31112825)
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AA seq
1252 aa
AA seq
DB search
MWDVTKVTLLLSFLTVAAAQGPIRNSSLLRKWSQTNKSRKLDYNMLTEPQQTTGVTEWTS
WFNIDHPGGNGDYERLEAIRFYYRERVCARPVAMEARTTDWVAAAETGEVTHFSLEKGFW
CINKEQPYGRICSNYYVRFQCPPVQAYWTDWAVWGPCSATACNDVGIQVRQRKCMSIQPL
PLLLVPPCQGPQTERRECATLPCEAKWTQWVPWGACSVTCGKGRRIRRRTCVRTSVTVQC
VGRAAEIQKCGKNPCRPKCKRECPEGRPSEDCSCCVCVGHMLQGEVLSMTGVPVVGARIA
LASRPKIIRARTDAKGLFRLPGVCSISPTQLYIRKEKFAPATASTSSNSTGLSWARAVLK
SAEKPYIVKHPEDKVRYEGQRVMLCCKATGSPMQDKYYWYHNGTLLDRNVFKYEEDLVLR
DLKSEQTGHYYCKASSQTGSIKSSQAFLSVIAKGTLACNPTPENHLIRLPVDCVQPGTDS
KLYNAGRCLHNKCAGSLDFDLRCRDGGGYCCGVQKMESRVIDCGSYSLPIKAVTECGCQK
CMVPKVLVRGRVVTADNDEPLRFGHMYIGKERVGTTGYKGGFTLNITPDTERLVVNFVDP
TEKFIDTPKVFIFDKRGGSVYHDVKVMRKQEPIDINAGETNTIDLGEIKGEDPIGQIVIP
PNSFHKNNGEVYEGTVKASVTFIDPRNITTAAAAPGDLNFVDDEGDMLPLRTYGMFSVDF
RDETNQEFLGAGAVQVLLDTQHVKMQEHIPKMKLWSLNPDTGVWEEESDFHYTQTTSGGN
GRSKREERTFLIGNMEIRERRLFNLDVPENRRCYVKVRAYMSDKFLATEQLEGVVISLIN
LEPKPGFSSNPRAWGRFDSVITGPNGACLPAFCDAQVPDAYTAYVTGIMGGEELEAAPST
PKMNPNIIGVSQPYLDKIDYQRSDHDDPALKKTAFRINLAKPNPNNLEETNGPIYPYQSL
IACENAEINANHFRFFRVEKDKYEYNVVPFQENDLTSWTGDYLSWWPNPQEFRACFIKVK
IQGQREVMIRSQNHGGTHPETVGQLYGIRDIRSTRDMHVTNISAACLEFKCSGMLFDQAA
VDRSLVSVLPQGNCRRVGINSLLKEYLTKHPPTSPNNESHAFNILAPVDPLGHNYGIYTV
TDQNPRVAKEIAIGRCFDGTSDGFSREMKSDTGVALTFSCPERTVPRESLFQRLQTNPSQ
TLSQMARDMREAQGLQVRGRSSRVVTYPSGSTSRRSSSSTRRRSTMRTQDRQ
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtgggacgttacaaaagtgacactactcctgtctttcctgactgtggccgcggctcaa
gggcccatcaggaacagctctctgctcaggaagtggagtcagacaaacaagagtaggaag
ctggactacaacatgctgaccgagccacagcagaccacaggcgtgactgaatggacatcc
tggttcaacattgaccatccaggggggaatggagactacgagcggttagaggccatccgg
ttctactacagggagagggtgtgtgcccggcctgtggccatggaggcccgcaccacggac
tgggtggcagcagcagagactggggaggtgactcacttcagcctggagaagggcttctgg
tgcatcaacaaggagcagccctacgggcgcatctgctccaactactacgtccgcttccag
tgcccaccagttcaggcctactggacggactgggctgtctggggcccctgctctgctaca
gcctgtaatgacgtgggcattcaggtccgtcagaggaagtgtatgagcatccagcccctg
cccttgctgctggttcccccatgccaggggccccagacagagaggagggagtgtgccacc
ctgccatgtgaagccaagtggactcagtgggttccgtggggcgcatgttcagtgacctgc
ggcaagggtcgcaggatcaggaggaggacctgtgtgagaacctctgtaacggtgcagtgc
gtgggacgagcagctgaaatccagaaatgtgggaagaatccatgccgacccaagtgtaag
cgtgagtgtcccgagggccgtcccagtgaggactgtagctgctgtgtgtgtgtgggccac
atgctccagggagaggtactcagtatgaccggtgtccccgtggtgggggccaggatagcg
ctggccagccgacccaagatcatccgtgcccgcactgacgccaagggcctcttcaggctc
ccaggggtgtgctccatctcccccacccagctctacatcaggaaggagaagttcgccccc
gccactgcatccacctccagcaacagcaccgggttatcctgggcacgggcggtcctaaag
tctgcagagaagccatacattgtaaagcacccagaggacaaagtgcgttatgagggacag
cgtgtgatgttatgctgcaaggcaacagggtcgcccatgcaagacaaatactactggtat
cacaatgggaccctattggacaggaacgtgttcaaatatgaagaggatctggtgctgaga
gacctgaagtctgagcagacaggacattactactgtaaagccagcagccaaacaggaagc
atcaagtcctcccaggcattcctcagcgttatcgctaaaggcacgctggcatgcaacccc
acacctgagaaccacctcattaggctgcctgtggactgtgttcagcctgggactgactct
aagctctacaacgccggccgctgcctccacaacaagtgtgcaggctccctggacttcgac
ctgcgctgcagggatggaggtggctattgctgcggggtccagaagatggagagccgggtg
atcgactgtgggagctacagcctgcccatcaaagctgtgactgagtgtggatgccagaag
tgtatggtgcccaaggtgcttgtacgtggcagggtggtcacagctgacaatgatgaacca
ctgcgtttcgggcacatgtacataggcaaggagagagtgggcaccacagggtacaaagga
ggcttcacgctcaatataaccccagacacagagaggctggtggtcaactttgtggatccc
acagaaaaattcattgacactcctaaggtgtttatctttgacaagagagggggctctgtt
taccatgacgtgaaggtgatgagaaagcaggaacccattgatatcaatgctggagagaca
aataccattgacttaggagaaatcaaaggagaggaccccattggacagattgtcatacct
ccaaattctttccacaaaaacaatggggaggtgtacgaaggtacggtgaaagccagtgtc
acctttattgaccccaggaacatcaccacagctgctgcagcgcctggtgatctcaacttt
gtggacgatgagggtgacatgcttccactgaggacatatgggatgttttccgttgacttc
agagatgaaacgaaccaggaattcctgggggctggagcagtccaagtactcttagacacg
cagcacgtcaaaatgcaagagcacattcccaaaatgaaactgtggtccctcaacccagac
acaggtgtctgggaggaggagagtgactttcactacactcagaccacatctggtggtaat
ggacggagcaagcgagaggagcgcactttcctcataggtaatatggaaatcagggagcgt
cgacttttcaacctggatgtgcctgagaaccgccgctgctacgtcaaagtgagggcgtac
atgagtgacaaattcctggccactgagcagttggaaggtgtggtcatcagcctgataaac
ctggagcccaagcctggattttcctctaaccccagagcatggggtcgctttgacagtgtg
ataaccggacccaacggagcctgcctgccagctttctgtgatgctcaggtgcctgatgct
tacacagcttacgtcacaggcattatgggtggtgaagaactggaagcagctccctcaact
cccaagatgaacccaaacatcattggagtgtctcagccatacttagacaagatagactac
cagcgttcagaccacgatgatccagctctcaagaaaacagccttcagaatcaacttggca
aaacccaaccccaataatttggaagagaccaacgggccaatatacccctatcagagttta
atagcctgtgaaaatgctgaaatcaatgccaaccatttccgattcttccgagtggaaaag
gacaaatacgaatataacgttgtgccctttcaagagaacgacttaacatcgtggacaggt
gactacctctcttggtggcccaaccctcaggagttcagggcttgcttcatcaaggtcaag
atccaggggcaaagggaggtcatgataaggtcacagaaccatggaggcacacaccctgag
actgtaggccagctgtacggcatcagagacatccgcagcacccgtgacatgcacgtgacc
aacatctccgcagcttgcctcgagttcaagtgcagtggcatgctcttcgaccaagccgca
gtcgataggtccctcgtatcagtcctcccacagggcaactgtcggagagtgggcatcaac
agcctcttaaaggagtacctgaccaagcacccccctacctcaccgaacaacgagtcacat
gccttcaacattctggcccccgtcgaccccttggggcacaactatgggatctacacagtc
acggaccagaacccaagggtggcaaaggagatcgccattggacgctgttttgatggtacc
tctgacggcttctctagagagatgaaatcagacactggagttgctctgaccttcagctgc
ccagaaaggactgtgcccagggagagtctcttccaacgcctccagacgaaccccagccag
accctgtctcagatggcccgggacatgagggaagcgcaggggctgcaggtcagaggaagg
tcctcccgggtagtgacctacccctctgggtccactagccgcagatccagctcctctacc
aggaggagatctacgatgcggacacaggacaggcagtag
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