KEGG   Coregonus clupeaformis (lake whitefish): 121576788
Entry
121576788         CDS       T08357                                 
Name
(RefSeq) ras-related protein Rab-11B-like
  KO
K07905  Ras-related protein Rab-11B
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121576788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121576788
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121576788
   04031 GTP-binding proteins [BR:cclu04031]
    121576788
Membrane trafficking [BR:cclu04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    121576788
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121576788
  Exosomal proteins of other body fluids (saliva and urine)
   121576788
  Exosomal proteins of colorectal cancer cells
   121576788
GTP-binding proteins [BR:cclu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    121576788
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU AAA_22 RsgA_GTPase Csa3_N Gtr1_RagA AAA_14 AAA_16 ABC_tran AAA_21 DUF3289 TniB AAA_24 FAD-SLDH PduV-EutP FeoB_N SRPRB NTPase_1 AAA_7 AAA_5
Other DBs
NCBI-GeneID: 121576788
NCBI-ProteinID: XP_041746192
LinkDB
Position
11:32199512..32203503
AA seq 217 aa
MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDSKTI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM
LVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIHRIVSQKQ
IADRSAHDESPGNNVVDISVPPTTDGQKNKVPCCQSL
NT seq 654 nt   +upstreamnt  +downstreamnt
atgggaacccgagacgacgaatacgactatctattcaaagtggtgctgatcggagactct
ggtgtggggaagagtaacctgctgtcccgtttcacacggaatgagttcaacctggagagc
aaaagcaccattggtgtggagtttgccacccgcagcattcaggtagacagcaagacgata
aaggcacagatctgggatacagctggacaggagcgctacagagccatcacctcagcgtac
taccggggggcagtgggggctctcctagtgtatgacattgccaagcatctaacctatgaa
aatgtggagcgctggctgaaggagctcagggatcatgctgataacaacatcgtcatcatg
ctggtgggcaacaagagtgacctgcgccacctcagggcagttcccacagacgaggctcgt
gcctttgcagagaagaatacgttatcatttattgaaacatcagctttggactccactaat
gtggaagaggcgttcaagaacatcctcacggaaatccaccgaatcgtatcacaaaagcag
atagctgacagatcagcacatgacgagtctccaggcaacaatgtagtggacatcagtgtc
ccccccaccaccgatgggcaaaaaaacaaagtaccgtgctgtcaaagcctgtga

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