Coregonus clupeaformis (lake whitefish): 121576819
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Entry
121576819 CDS
T08357
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121576819
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121576819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
Phage_Mu_Gp27
DUF7750
Motif
Other DBs
NCBI-GeneID:
121576819
NCBI-ProteinID:
XP_041746260
LinkDB
All DBs
Position
11:complement(33628329..33655924)
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AA seq
1049 aa
AA seq
DB search
MAASNYYGFTHGAGPQYSVQPPPAYAHPTTASYNVQPAPAVAHAVTASYAPAQPARPVAS
AYPVAYQNHPAPPDYGYRQPDPTPQPTTTPQTYQLPVYTETDNYSYGRPPAATSYETKQY
YQTSIAPAQRTPTEAYYQTGVKSGYSPVSTVYSQPPPPQRQVSALKPLAPASSVSTSYNV
YPVSTSVQQPPISSYTPCSSFNSTAATSYSGVSYSTYDSSGYTSTPSYYQPAQLPPPQPQ
PPPQQSQPPMQPPPKQLTSSSWSNAGSNMVTAPTVNAYKKPMFHQNKLQKPKGPPKQPQL
HYCDICKISCAGPQTYREHLEGQKHKKKEAALKSGSAGGSNGPRGIQTQLRCELCDIACT
GVDAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPVLVNNAPIISTSTAGKTTPIVVTATAP
VALPKPVVVNAVKAPAPVKKPVTPKITILANKPATPQVAKVNEAKQSATASKSETTSDDE
DGDGVGRQGDVQPVGHDYVEEVRNDDGKVIRFHCKLCECSFNDPNAKDMHLKGRRHRLQY
KKKVNPELPVEIKPSNRARKLQEGKLRKQKQKAVLKRQRDDEQRWHLEMRSEPDSSWHTE
MSRYEEDMYWRRMEEEQLYWGEQRHRMAPPPLMSRPGMPVPPLLQPMRRPDSPDDRHIMA
KHSTIYPVEEELQAVQRIVSHTERALKLVSDSLLEKEPPAAVTEAVTEAVTEAVTEAVTE
AVTEAVTEAVTEAVTEAVAGEKVPDNQAARMLKGVMRVGILAKGLLLHGDRNVELILLAA
KKPTLSLLKDIAEQLPKEMAPFSEDQYEVMSHPEEANIVIFSSKEPKMQVTISLTSPLMR
EDPAPEKEEKAGDKAAEKGVPEKDPADVLNQKKCLEYLAALRHAKWFQARANGLQSCVII
IRVLRDLCQRVPTWGKMPSWAMELLVEKAISSATGPLGPGEAMRRVLECIATGILLPDGP
GLLDPCEKHQTDALGSMTKQAREDITASAQHALRLLAFRQIHKVLGMDSLPASKASARNR
KRRRDGSETGEGEGEGKKDKKEDAEEMDA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaagcaattattatggattcacgcatggtgcgggtcctcagtacagcgttcag
cctccaccggcctacgcccaccccacgacagccagctacaatgtacagccggcccctgcc
gtggcccatgcagtgaccgcctcctatgcccctgcacaaccagccaggcccgtggcctct
gcctacccggtggcctaccagaaccaccctgcccccccagactatggctaccggcagccg
gaccccacgccccaacccaccaccaccccacagacataccagctaccggtatacaccgaa
acggataactacagttacggacgtccgcctgcagccactagttatgagactaagcagtac
taccagacgagtatagctccagcccagaggacaccaacagaagcttactaccagacaggc
gtgaagagtggctacagtccagtcagcacagtgtacagccagccgccaccaccacagagg
caggtctcagctttaaagcctctggcccccgccagctcagtgtccactagctacaacgtc
tacccagtgtccaccagtgtacagcagcctcccatctcgtcttacaccccctgctcctcc
ttcaactccacagctgccacctcctactcgggcgtcagctactctacttatgattcgagt
ggctacacttccaccccctcctactaccagcctgctcagctgcctcctcctcagccccag
ccgcccccccagcagtcccagccgcccatgcagccgcctcccaagcagctcaccagctcc
tcctggagcaacgcaggcagcaacatggtgaccgctcccacggtcaacgcctacaagaag
cccatgttccaccagaacaagcttcagaagccgaaagggccgcccaagcagccccagttg
cactactgtgacatctgcaagatcagctgtgctggcccgcagacatacagggagcacctc
gagggccagaagcacaagaagaaggaggcagctctgaagtctggcagcgcgggggggagc
aacgggccccgggggattcagacccagctacgctgtgaactatgtgacattgcctgcact
ggcgtagacgcgtacgccgcccatatccgaggggccaagcaccagaaggtggtgaagctc
cacaccaaactaggcaaacctataccttcaactgagcctgttttagtgaacaatgctcca
attatctcaacgtcgacagctgggaagacaacccctatcgttgttacagcaactgcccct
gtagcgctacccaaaccggtggttgtaaacgccgtaaaggccccagcacctgtgaagaag
ccagtcacacccaaaataaccatccttgccaacaagccggcaacccctcaagtagccaag
gtgaatgaggccaagcagtcagcaacagcgtctaagagtgagaccacgagtgacgatgag
gacggagatggagtggggaggcagggggacgtccagcctgtgggacatgactatgtggag
gaggtgcgtaatgatgatgggaaggtgattcgcttccactgtaaactctgtgaatgcagt
ttcaatgaccccaacgctaaagacatgcacttgaaggggcgcaggcaccggctgcagtac
aagaagaaggtgaacccagagctgccggtggagatcaagcccagtaaccgggccaggaag
ctgcaggagggcaaactgaggaaacagaaacagaaggctgtgctgaagagacagcgggat
gatgagcagcgctggcacttggagatgaggtcagagccagacagcagctggcacacagag
atgagccgctatgaggaggacatgtactggaggaggatggaggaggagcagttgtactgg
ggggagcagagacacagaatggccccccctccgctcatgagccggcccggcatgccagtg
ccccccctactgcagcctatgcgtcggccggactccccagacgaccgccacatcatggcc
aaacactccaccatctaccctgtggaggaggagctgcaggcggtgcaaaggatcgtctcc
cacactgagagagccctcaaactggtgtctgactccctgctggagaaagagcctcccgct
gctgtgacagaggctgtgacagaggctgtgacagaggctgtgacagaggctgtgacagag
gctgtgacagaggctgtgacagaggctgtgacagaggctgtgacagaggctgttgctgga
gagaaagtaccggacaaccaggcagcccgtatgctgaagggggtgatgagggtgggcatc
ctggccaagggcctgctgctccatggggataggaacgtggagctcattctgctggctgcc
aagaagcccaccctctctctgctgaaggacatcgctgagcagctacccaaagaaatggcg
ccattttctgaagatcagtatgaggtgatgtctcaccctgaggaagccaacatcgtgatt
ttttcgagcaaggagccaaaaatgcaggtcaccatctctctaacctcgccgctgatgagg
gaggaccctgcccctgagaaggaggaaaaggcaggagacaaagcggctgagaaaggggtg
cctgagaaggaccctgctgatgttttgaaccagaagaagtgcctggagtacctagctgct
ctgagacacgccaagtggttccaggctcgtgccaatggtcttcagtcctgtgtgatcatt
attagagtgttacgggatctctgccagcgagtgccaacctggggcaagatgccatcctgg
gctatggagctgctggtagagaaggccatcagcagtgccacggggcccctcggcccaggg
gaagccatgcgtagggtcctggaatgtatcgctacaggcatcctactgccagacggtcct
gggctgctggacccctgtgagaaacaccaaaccgatgctctagggagcatgaccaaacaa
gccagggaagacattactgccagcgcacagcatgctctgcgactgctggcgttccgtcag
atccacaaggttctgggaatggactccctgccggcgtccaaggccagcgctcggaaccgc
aagcgcagacgggacgggagcgagacgggagaaggagagggggagggcaagaaagacaag
aaggaggatgcagaagagatggatgcttga
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integrated database retrieval system
