Coregonus clupeaformis (lake whitefish): 121576835
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Entry
121576835 CDS
T08357
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121576835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121576835
03012 Translation factors [BR:
cclu03012
]
121576835
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
121576835
Translation factors [BR:
cclu03012
]
Eukaryotic type
Release factors
121576835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
121576835
NCBI-ProteinID:
XP_041746301
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All DBs
Position
1:74237231..74249043
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AA seq
584 aa
AA seq
DB search
MDPRDTAPDSWEQEEDAEARAAAGLQSALAALNVNAKPFVPNVNAAVFVPTFFQSSPTEI
PISDGHGAEPVARMELSETVALVENGGGTEADIMVEVEAWEQKEEPGEGEPGGGGALGEE
GGSSEEAQGKEEMMEEEEEEELPMLKVIPLPPDAPKKEHVNVVFIGHVDAGKSTIGGQIM
YLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFT
ILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHL
IVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIYFMPCSGLTGANLKEPIEE
CTWYTGLPFIPHLDSLPSFNRITDGPVRLPIVDKYKDMGTVILGKLESGSIAKAQQLVMM
PNRHTVEVLSLLSDEVETDEAVPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDA
QIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKTGEKSKTRPRFVKQDQVCIA
RLRCAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcgagacacagccccggattcatgggagcaggaggaggatgccgaggcccga
gccgccgcgggactccagtccgctctcgccgctctcaacgtcaatgccaagccgtttgtc
ccgaatgtcaacgcggcggtgtttgtaccgaccttctttcaaagcagccccacggaaatc
ccaatatccgacggtcacggtgctgagccagttgccagaatggagctgtcagaaacagtt
gctctggtggagaacggaggagggacagaagcagacataatggtggaggtggaggcgtgg
gagcagaaagaggaacctggggaaggagaaccaggaggagggggagccctgggagaagag
gggggttccagtgaggaggcgcagggaaaggaggagatgatggaggaggaggaagaggag
gagctgcccatgctcaaagtaatcccgctcccaccagacgccccgaagaaggagcatgtc
aatgtggtgttcatcggtcatgtggatgctggtaaatcaactattggaggtcagatcatg
tatttgacagggatggtggagaaaagaaccctggagaaatatgaaagggaagcaaaagaa
aagaacagagagacatggtacctgtcctgggccctggacaccaaccaggaggagcgagac
aaggggaagacggtggaggtggggagagcctactttgagacagagaaaaagcactttact
atcctggatgcccccggccacaaaagctttgtccccaacatgatcggtggggcgtcacag
gctgacctggcagtgctggtgatctcggccagaaaaggagagtttgagacaggctttgag
aagggaggccagacgcgggagcatgccatgctggccaagacagctggagtcaaacacctc
atcgtcctcgtcaacaagatggatgaccccaccgtcaactggagcttggaaaggtatgag
gaatgtaaagagaagttagtgccatttctgaaaaaggtgggcttcaacccaaagaaggac
atctacttcatgccttgctctgggctgacgggagccaacctcaaggagcccatagaggag
tgcacgtggtacacggggttgccattcatcccacatctggacagcctgccaagcttcaac
agaatcacagatggccctgtcagattacccatcgtagacaaatacaaggatatgggcacg
gtgatcctggggaagctggagtccggctctattgccaaagcccagcagctggtcatgatg
cctaacaggcacacagtggaggtgctgagcctgctgtctgacgaggtggagacagatgaa
gctgttcctggagagaacctgaagctaaggctgaagggcatcgaggaagaggagattctg
cctggcttcatcctctgtaacgctgagaacctctgccactccggacgcacctttgacgcc
cagatcgtcatcattgaacataaatccatcatctgcccaggttacaacgcagtcctacac
atccacacctgtattgaagaagtagaaatcacagccttaatctgtctagtggacaagaag
acaggtgagaagagcaagacgcgacctcgctttgtcaaacaggaccaggtgtgcatcgcc
cggctacgttgtgccggaaccatctgcctcgagaccttcaaagacttcccacagatgggg
aggttcaccctacgagacgaaggcaaaaccattgctattggcaaagtgctgaagctggta
ccagagaaggactaa
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